RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 PIGUQ9H490 435 aa14.03□□□□□ -0.16
ITGB4-202ENST00000449880 IKZF3Q9UKT9 509 aa14.03□□□□□ -0.16
ITGB4-202ENST00000449880 PNMA8BQ9ULN7 279 aaPredicted RBP14.03□□□□□ -0.16
ITGB4-202ENST00000449880 TCRBV9S1A1TA0A576 114 aa14.03□□□□□ -0.16
ITGB4-202ENST00000449880 CXCL11O14625 94 aa14.03□□□□□ -0.16
ITGB4-202ENST00000449880 RPS7P62081 194 aaKnown RBP14.03□□□□□ -0.16
ITGB4-202ENST00000449880 FMO1Q01740 532 aa14.03□□□□□ -0.16
ITGB4-202ENST00000449880 EIF3MQ7L2H7 374 aaKnown RBP14.03□□□□□ -0.16
ITGB4-202ENST00000449880 AMIGO2Q86SJ2 522 aa14.03□□□□□ -0.16
ITGB4-202ENST00000449880 BRSK2Q8IWQ3 736 aa14.03□□□□□ -0.16
ITGB4-202ENST00000449880 LRRC57Q8N9N7 239 aa14.03□□□□□ -0.16
ITGB4-202ENST00000449880 DQX1Q8TE96 717 aaKnown RBP14.03□□□□□ -0.16
ITGB4-202ENST00000449880 YTHDF1Q9BYJ9 559 aaKnown RBP14.03□□□□□ -0.16
ITGB4-202ENST00000449880 KLHL28Q9NXS3 571 aa14.03□□□□□ -0.16
ITGB4-202ENST00000449880 ARFGEF2Q9Y6D5 1785 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 LOC110117498-PIK3R3F6TDL0 507 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 IFRD1O00458 451 aaPredicted RBP14.02□□□□□ -0.16
ITGB4-202ENST00000449880 DBTP11182 482 aaKnown RBP14.02□□□□□ -0.16
ITGB4-202ENST00000449880 TGFBR2P37173 567 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 GALNT18Q6P9A2 607 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 PHACTR4Q8IZ21 702 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 PIK3R3Q92569 461 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 ZNF670Q9BS34 389 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 PIF1Q9H611 641 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 ACTR8Q9H981 624 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 UBIAD1Q9Y5Z9 338 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 ZNF142P52746 1687 aaPredicted RBP14.02□□□□□ -0.16
ITGB4-202ENST00000449880 UBE2QL1A1L167 161 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 FAM47E-STBD1D6RA91 191 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 PPP1R11O60927 126 aaPredicted RBP14.02□□□□□ -0.16
ITGB4-202ENST00000449880 AVILO75366 819 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 SLC16A1P53985 500 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 EFEMP1Q12805 493 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 ECM1Q16610 540 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 RUNDC3AQ59EK9 446 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 HGSNATQ68CP4 663 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 NECAB2Q7Z6G3 386 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 REPS1Q96D71 796 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 ACOX2Q99424 681 aa14.02□□□□□ -0.16
ITGB4-202ENST00000449880 VTNP04004 478 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 COL6A2P12110 1019 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 HPCAL1P37235 193 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 ADGRE1Q14246 886 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 APBA2Q99767 749 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 SMPD3Q9NY59 655 aaPredicted RBP14.02□□□□□ -0.17
ITGB4-202ENST00000449880 SLC17A7Q9P2U7 560 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 ERGIC3Q9Y282 383 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 ADAMTSL3P82987 1691 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 A0A1W2PPM1 405 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 GPIP06744 558 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 AKAP5P24588 427 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 PYDC2Q56P42 97 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 TNFAIP8L3Q5GJ75 292 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 HYIQ5T013 277 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 CCNYL2Q5T2Q4 361 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 PRR23CQ6ZRP0 262 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 RBM12BQ8IXT5 1001 aaKnown RBP14.02□□□□□ -0.17
ITGB4-202ENST00000449880 METTL6Q8TCB7 284 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 HELQQ8TDG4 1101 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 CPB2Q96IY4 423 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 PPP3R2Q96LZ3 170 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 TTYH3Q9C0H2 523 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 LRRC4CQ9HCJ2 640 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 PHF11Q9UIL8 331 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 FZD1Q9UP38 647 aa14.02□□□□□ -0.17
ITGB4-202ENST00000449880 BCLAF3A2AJT9 711 aaKnown RBP14.01□□□□□ -0.17
ITGB4-202ENST00000449880 MAP3K6O95382 1288 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 ZNF143P52747 638 aaPredicted RBP14.01□□□□□ -0.17
ITGB4-202ENST00000449880 ORC1Q13415 861 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 TXNDC11Q6PKC3 985 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 P2RX7Q99572 595 aaKnown RBP14.01□□□□□ -0.17
ITGB4-202ENST00000449880 ACE2Q9BYF1 805 aaPredicted RBP14.01□□□□□ -0.17
ITGB4-202ENST00000449880 ACADMP11310 421 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 HPGDP15428 266 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 PAICSP22234 425 aaKnown RBP14.01□□□□□ -0.17
ITGB4-202ENST00000449880 COPZ1P61923 177 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 ZCCHC8Q6NZY4 707 aaKnown RBP14.01□□□□□ -0.17
ITGB4-202ENST00000449880 MILR1Q7Z6M3 343 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 FAM131BQ86XD5 332 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 GPATCH1Q9BRR8 931 aaKnown RBP14.01□□□□□ -0.17
ITGB4-202ENST00000449880 TELO2Q9Y4R8 837 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 LRRC42Q9Y546 428 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 TRUB2O95900 331 aaKnown RBP14.01□□□□□ -0.17
ITGB4-202ENST00000449880 CST1P01037 141 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 BCAP31P51572 246 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 RENBPP51606 427 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 STARD3Q14849 445 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 RBM20Q5T481 1227 aaKnown RBP14.01□□□□□ -0.17
ITGB4-202ENST00000449880 RETSATQ6NUM9 610 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 STAG3L4Q8TBR4 150 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 CIPCQ9C0C6 399 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 CAPN10Q9HC96 672 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 PEX16Q9Y5Y5 336 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 PEX11AO75192 247 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 SPATA31C1P0DKV0 1188 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 NAGLUP54802 743 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 RAB10P61026 200 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 ADAM17P78536 824 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 CDK18Q07002 472 aa14.01□□□□□ -0.17
ITGB4-202ENST00000449880 PLD1Q13393 1074 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms