RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 RALGPS1Q5JS13 557 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 CAMK1DQ8IU85 385 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 KLHDC8BQ8IXV7 354 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 SLC25A41Q8N5S1 370 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 DNAAF3Q8N9W5 541 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 KDM1BQ8NB78 822 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 MCUQ8NE86 351 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 PTPRN2Q92932 1015 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 TADA1Q96BN2 335 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 TDRD1Q9BXT4 1180 aaKnown RBP14.78□□□□□ -0.04
TNF-208ENST00000449264 TMEM245Q9H330 911 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 ATP13A3Q9H7F0 1226 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 MUTYHQ9UIF7 546 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 CHKBQ9Y259 395 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 STON1Q9Y6Q2 735 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 MAN2B1O00754 1011 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 RNF40O75150 1001 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 SIN3BO75182 1162 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 UGT2B4P06133 528 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 CA4P22748 312 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 SERPINA4P29622 427 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 SESN2P58004 480 aaPredicted RBP14.77□□□□□ -0.04
TNF-208ENST00000449264 RAD51Q06609 339 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 CDK18Q07002 472 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 BCL2L1Q07817 233 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 BBS9Q3SYG4 887 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 HP1BP3Q5SSJ5 553 aaPredicted RBP14.77□□□□□ -0.04
TNF-208ENST00000449264 FNBP1LQ5T0N5 605 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 ZNF852Q6ZMS4 543 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 LINC00523Q86TU6 105 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 CAND1Q86VP6 1230 aaKnown RBP14.77□□□□□ -0.04
TNF-208ENST00000449264 GJD3Q8N144 294 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 PDIK1LQ8N165 341 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 EIF1ADQ8N9N8 165 aaKnown RBP14.77□□□□□ -0.04
TNF-208ENST00000449264 XAB2Q9HCS7 855 aaKnown RBP14.77□□□□□ -0.04
TNF-208ENST00000449264 NCOR1O75376 2440 aa14.77□□□□□ -0.04
TNF-208ENST00000449264 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.77□□□□□ -0.05
TNF-208ENST00000449264 POP4O95707 220 aaKnown RBP14.77□□□□□ -0.05
TNF-208ENST00000449264 HNRNPLP14866 589 aaKnown RBP eCLIP14.77□□□□□ -0.05
TNF-208ENST00000449264 ADRA1AP35348 466 aa14.77□□□□□ -0.05
TNF-208ENST00000449264 SLC14A2Q15849 920 aa14.77□□□□□ -0.05
TNF-208ENST00000449264 MSS51Q4VC12 460 aa14.77□□□□□ -0.05
TNF-208ENST00000449264 CFAP58Q5T655 872 aa14.77□□□□□ -0.05
TNF-208ENST00000449264 SIX5Q8N196 739 aa14.77□□□□□ -0.05
TNF-208ENST00000449264 STK40Q8N2I9 435 aa14.77□□□□□ -0.05
TNF-208ENST00000449264 LPCAT1Q8NF37 534 aa14.77□□□□□ -0.05
TNF-208ENST00000449264 FEM1CQ96JP0 617 aa14.77□□□□□ -0.05
TNF-208ENST00000449264 NECAB3Q96P71 396 aaPredicted RBP14.77□□□□□ -0.05
TNF-208ENST00000449264 HEPHQ9BQS7 1158 aa14.77□□□□□ -0.05
TNF-208ENST00000449264 SAYSD1Q9NPB0 183 aa14.77□□□□□ -0.05
TNF-208ENST00000449264 IL36AQ9UHA7 158 aa14.77□□□□□ -0.05
TNF-208ENST00000449264 PCDHB9Q9Y5E1 797 aa14.77□□□□□ -0.05
TNF-208ENST00000449264 KRBA1A5PL33 1030 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 ERLIN1O75477 346 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 LEFTY1O75610 366 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 KLF8O95600 359 aaPredicted RBP14.76□□□□□ -0.05
TNF-208ENST00000449264 CTSLP07711 333 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 PDHA1P08559 390 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 PRKCQQ04759 706 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 DHX9Q08211 1270 aaKnown RBP14.76□□□□□ -0.05
TNF-208ENST00000449264 CDH17Q12864 832 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 PDIA2Q13087 525 aaKnown RBP14.76□□□□□ -0.05
TNF-208ENST00000449264 CCINQ13939 588 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 BRD3Q15059 726 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 E2F5Q15329 346 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 SLC1A5Q15758 541 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 POM121L1PQ3SYA9 428 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 MAP9Q49MG5 647 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 SIRPB2Q5JXA9 342 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 C9orf64Q5T6V5 341 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 DENND2CQ68D51 928 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 LRRC8BQ6P9F7 803 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 CENPUQ71F23 418 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 CACUL1Q86Y37 369 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 AENQ8WTP8 325 aaKnown RBP14.76□□□□□ -0.05
TNF-208ENST00000449264 OR8D1Q8WZ84 308 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 RMDN1Q96DB5 314 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 TUBGCP5Q96RT8 1024 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 FRMD8Q9BZ67 464 aaPredicted RBP14.76□□□□□ -0.05
TNF-208ENST00000449264 CD320Q9NPF0 282 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 CASS4Q9NQ75 786 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 WNT16Q9UBV4 365 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 WASF2Q9Y6W5 498 aa14.76□□□□□ -0.05
TNF-208ENST00000449264 CCDC151A5D8V7 595 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 NPC1O15118 1278 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 SOCS5O75159 536 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 PPFIA2O75334 1257 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 NDST3O95803 873 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 ATXN1LP0C7T5 689 aaKnown RBP14.75□□□□□ -0.05
TNF-208ENST00000449264 CHRM1P11229 460 aaPredicted RBP14.75□□□□□ -0.05
TNF-208ENST00000449264 MLNP12872 115 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 TPH1P17752 444 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 MGAT1P26572 445 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 NTSR1P30989 418 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 EPHB1P54762 984 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 CRADDP78560 199 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 ELAVL3Q14576 367 aaKnown RBP14.75□□□□□ -0.05
TNF-208ENST00000449264 UBXN2BQ14CS0 331 aa14.75□□□□□ -0.05
TNF-208ENST00000449264 FASTKD3Q14CZ7 662 aaKnown RBP14.75□□□□□ -0.05
TNF-208ENST00000449264 ARSIQ5FYB1 569 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms