RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 USP12O75317 370 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 AVILO75366 819 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 POP4O95707 220 aaKnown RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 AGTP01019 485 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 PRLP01236 227 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 ATXN1LP0C7T5 689 aaKnown RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 CCNHP51946 323 aaPredicted RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 PDIA2Q13087 525 aaKnown RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 ZNF234Q14588 700 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 SLC1A5Q15758 541 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 MYLK3Q32MK0 819 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 HNRNPA1L2Q32P51 320 aaKnown RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 Q6ZVU0 165 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 TRMT10CQ7L0Y3 403 aaKnown RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 CCDC25Q86WR0 208 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 AGGF1Q8N302 714 aaeCLIP19.46■□□□□ 0.71
RPS28-202ENST00000449223 PTPRN2Q92932 1015 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 ATP13A3Q9H7F0 1226 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 TCF20Q9UGU0 1960 aaKnown RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 CKAP5Q14008 2032 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 SHISA7A6NL88 538 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 K7EQS6 105 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 FGF1P05230 155 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 DRD1P21728 446 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 MAGEA4P43358 317 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 KIR2DL1P43626 348 aaPredicted RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 NPY2RP49146 381 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 PMS2P54278 862 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 RPL26P61254 145 aaKnown RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 MSLNQ13421 630 aaPredicted RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 ACCSLQ4AC99 568 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 CCDC38Q502W7 563 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 DPY19L3Q6ZPD9 716 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 RNF135Q8IUD6 432 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 ZBED8Q8IZ13 594 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 EZH1Q92800 747 aaPredicted RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 LRIG1Q96JA1 1093 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 IL22Q9GZX6 179 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 PABPC3Q9H361 631 aaKnown RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 CDC42EP4Q9H3Q1 356 aaKnown RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 SAYSD1Q9NPB0 183 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 BFARQ9NZS9 450 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 HECAQ9UBI9 543 aaPredicted RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 EVLQ9UI08 416 aaPredicted RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 RPL26L1Q9UNX3 145 aaKnown RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 RAI2Q9Y5P3 530 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 EDDM13A0A1B0GTR0 161 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 SDR42E2A6NKP2 422 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 NDST3O95803 873 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 TSHRP16473 764 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 RAD51Q06609 339 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 TRAF2Q12933 501 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 FASTKD3Q14CZ7 662 aaKnown RBP19.45■□□□□ 0.7
RPS28-202ENST00000449223 PCSK7Q16549 785 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 BBS9Q3SYG4 887 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 CCNJLQ8IV13 435 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 DNAAF3Q8N9W5 541 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 ECHDC3Q96DC8 303 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 IFT43Q96FT9 208 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 ZNF641Q96N77 438 aaPredicted RBP19.45■□□□□ 0.7
RPS28-202ENST00000449223 TTC25Q96NG3 672 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 NAT9Q9BTE0 207 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 EPB41L4BQ9H329 900 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 SORCS3Q9UPU3 1222 aa19.45■□□□□ 0.7
RPS28-202ENST00000449223 TTC4O95801 387 aa19.44■□□□□ 0.7
RPS28-202ENST00000449223 ALADP13716 330 aa19.44■□□□□ 0.7
RPS28-202ENST00000449223 SERPINA4P29622 427 aa19.44■□□□□ 0.7
RPS28-202ENST00000449223 TNNT3P45378 269 aaPredicted RBP19.44■□□□□ 0.7
RPS28-202ENST00000449223 RECQLP46063 649 aaPredicted RBP19.44■□□□□ 0.7
RPS28-202ENST00000449223 BCL2L1Q07817 233 aa19.44■□□□□ 0.7
RPS28-202ENST00000449223 UAP1Q16222 522 aaPredicted RBP19.44■□□□□ 0.7
RPS28-202ENST00000449223 FNDC3BQ53EP0 1204 aaKnown RBP19.44■□□□□ 0.7
RPS28-202ENST00000449223 SIRPB2Q5JXA9 342 aa19.44■□□□□ 0.7
RPS28-202ENST00000449223 PTCD2Q8WV60 388 aaKnown RBP19.44■□□□□ 0.7
RPS28-202ENST00000449223 EBNA1BP2Q99848 306 aaKnown RBP19.44■□□□□ 0.7
RPS28-202ENST00000449223 APOL2Q9BQE5 337 aa19.44■□□□□ 0.7
RPS28-202ENST00000449223 ADGRE3Q9BY15 652 aa19.44■□□□□ 0.7
RPS28-202ENST00000449223 SEMA4AQ9H3S1 761 aa19.44■□□□□ 0.7
RPS28-202ENST00000449223 PCDHGC4Q9Y5F7 938 aa19.44■□□□□ 0.7
RPS28-202ENST00000449223 MYLKQ15746 1914 aa19.44■□□□□ 0.7
RPS28-202ENST00000449223 A0A1W2PQ67 120 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 PGLSO95336 258 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 ELK3P41970 407 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 IL12RB1P42701 662 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 CHRNA4P43681 627 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 SLC44A4Q53GD3 710 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 IER5LQ5T953 404 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 EGFLAMQ63HQ2 1017 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 FSTL4Q6MZW2 842 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 FBXO36Q8NEA4 188 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 PYROXD1Q8WU10 500 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 HEPHQ9BQS7 1158 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 OSBPL1AQ9BXW6 950 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 FUT8Q9BYC5 575 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 NINJ2Q9NZG7 142 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 WASF2Q9Y6W5 498 aa19.43■□□□□ 0.7
RPS28-202ENST00000449223 MAGEB16A2A368 324 aa19.42■□□□□ 0.7
RPS28-202ENST00000449223 RIPK2O43353 540 aa19.42■□□□□ 0.7
RPS28-202ENST00000449223 BANF1O75531 89 aa19.42■□□□□ 0.7
RPS28-202ENST00000449223 ABHD2P08910 425 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms