RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 SETXQ7Z333 2677 aaKnown RBP14.77□□□□□ -0.04
USP39-206ENST00000448971 TBC1D3DA0A087WVF3 549 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 TBC1D3IA0A087WXS9 549 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 TBC1D3EA0A087X179 549 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 TBC1D3KA0A087X1G2 549 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 TBC1D3FA6NER0 549 aaPredicted RBP14.77□□□□□ -0.05
USP39-206ENST00000448971 TBC1D3LB9A6J9 549 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 MFSD11O43934 449 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 PALMO75781 387 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 ATXN1LP0C7T5 689 aaKnown RBP14.77□□□□□ -0.05
USP39-206ENST00000448971 TBC1D3HP0C7X1 549 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 ITGB7P26010 798 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 GKP32189 559 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 SLC1A1P43005 524 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 PPP2CBP62714 309 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 PPP2CAP67775 309 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 RAD51Q06609 339 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 AFMIDQ63HM1 303 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 TBC1D3GQ6DHY5 549 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 TBC1D3CQ6IPX1 549 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 IL27RAQ6UWB1 636 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 RAD9BQ6WBX8 426 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 ARHGAP36Q6ZRI8 547 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 ERN2Q76MJ5 926 aaKnown RBP14.77□□□□□ -0.05
USP39-206ENST00000448971 TBC1D3Q8IZP1 549 aaPredicted RBP14.77□□□□□ -0.05
USP39-206ENST00000448971 TSC1Q92574 1164 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 IPO11Q9UI26 975 aaKnown RBP14.77□□□□□ -0.05
USP39-206ENST00000448971 TFR2Q9UP52 801 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 RAXQ9Y2V3 346 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 HYOU1Q9Y4L1 999 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 PCDHGB2Q9Y5G2 931 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 EPN1Q9Y6I3 576 aaPredicted RBP14.77□□□□□ -0.05
USP39-206ENST00000448971 SLCO1B1Q9Y6L6 691 aa14.77□□□□□ -0.05
USP39-206ENST00000448971 CER1O95813 267 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 UGT2B4P06133 528 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 IGHV4-34P06331 123 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 CD27P26842 260 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 CSNK1EP49674 416 aaKnown RBP14.76□□□□□ -0.05
USP39-206ENST00000448971 ARSEP51690 589 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 IL10RBQ08334 325 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 ZNF235Q14590 738 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 PIP5KL1Q5T9C9 394 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 TMCO4Q5TGY1 634 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 NCBP2-AS2Q69YL0 99 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 FBXL19Q6PCT2 694 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 PARS2Q7L3T8 475 aaKnown RBP14.76□□□□□ -0.05
USP39-206ENST00000448971 ADAT2Q7Z6V5 191 aaKnown RBP14.76□□□□□ -0.05
USP39-206ENST00000448971 KIAA1328Q86T90 577 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 TP53INP2Q8IXH6 220 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 RHOT1Q8IXI2 618 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 PLPP6Q8IY26 295 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 ACRBPQ8NEB7 543 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 FAM71BQ8TC56 605 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.76□□□□□ -0.05
USP39-206ENST00000448971 NSMCE1Q8WV22 266 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 HNRNPLLQ8WVV9 542 aaKnown RBP14.76□□□□□ -0.05
USP39-206ENST00000448971 FAM131CQ96AQ9 280 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 LRIG1Q96JA1 1093 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 DCBLD2Q96PD2 775 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 BBC3Q96PG8 261 aaPredicted RBP14.76□□□□□ -0.05
USP39-206ENST00000448971 OSBPL1AQ9BXW6 950 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 KDM4CQ9H3R0 1056 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 LHX3Q9UBR4 397 aa14.76□□□□□ -0.05
USP39-206ENST00000448971 A0A0A6YYK5 440 aaPredicted RBP14.75□□□□□ -0.05
USP39-206ENST00000448971 A0A1B0GVT2 93 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 A0A1W2PPC4 97 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 RNF103O00237 685 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 BUB1BO60566 1050 aaPredicted RBP14.75□□□□□ -0.05
USP39-206ENST00000448971 POP4O95707 220 aaKnown RBP14.75□□□□□ -0.05
USP39-206ENST00000448971 ADRB3P13945 408 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 COMTP21964 271 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 MAT2AP31153 395 aaKnown RBP14.75□□□□□ -0.05
USP39-206ENST00000448971 NAP1L1P55209 391 aaKnown RBP14.75□□□□□ -0.05
USP39-206ENST00000448971 CAMK2BQ13554 666 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 RFTN1Q14699 578 aaPredicted RBP14.75□□□□□ -0.05
USP39-206ENST00000448971 TCEAL1Q15170 157 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 CYTH1Q15438 398 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 TEAD4Q15561 434 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 MYLK3Q32MK0 819 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 ANKRD20A8PQ5CZ79 823 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 CFAP58Q5T655 872 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 MARCH9Q86YJ5 346 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 BBS5Q8N3I7 341 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 PAF1Q8N7H5 531 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 RHBDD1Q8TEB9 315 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 CDC6Q99741 560 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 HDAC8Q9BY41 377 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 GOLPH3Q9H4A6 298 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 PREBQ9HCU5 417 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 SCUBE2Q9NQ36 999 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 AASDHPPTQ9NRN7 309 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 TPX2Q9ULW0 747 aaKnown RBP14.75□□□□□ -0.05
USP39-206ENST00000448971 BTBD3Q9Y2F9 522 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 TMEM131Q92545 1883 aa14.75□□□□□ -0.05
USP39-206ENST00000448971 TRABD2BA6NFA1 517 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 FLRT2O43155 660 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 PCDH8O95206 1070 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 MAP3K6O95382 1288 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 PIGNO95427 931 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 KDELR1P24390 212 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms