RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 C15orf59Q2T9L4 293 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 DET1Q7L5Y6 550 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 CROCCP2Q86T23 111 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZDHHC12Q96GR4 267 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 RSPH9Q9H1X1 276 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 CCSER2Q9H7U1 834 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 ARHGAP26Q9UNA1 814 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 ASCC3Q8N3C0 2202 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 IGKV6D-21A0A0A0MT36 114 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 A0A1W2PQC6 194 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 EFCAB8A8MWE9 144 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 PGRMC1O00264 195 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 PAGE1O75459 146 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 BMP4P12644 408 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 EPHB4P54760 987 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZNF33AQ06730 810 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 LNX1Q8TBB1 728 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 HCFC1R1Q9NWW0 138 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 IFT80Q9P2H3 777 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 SCN7AQ01118 1682 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 TMEM189-UBE2V1I3L0A0 370 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 ACOT7O00154 380 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 GPC4O75487 556 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZNF7P17097 686 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 GGCXP38435 758 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 TUBB4BP68371 445 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 RBL2Q08999 1139 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 CDC16Q13042 620 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 C1orf61Q13536 156 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 PPP1R15BQ5SWA1 713 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 OR6K2Q8NGY2 324 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 FGD4Q96M96 766 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 KCNK16Q96T55 309 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 TTYH1Q9H313 450 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 APOBEC3BQ9UH17 382 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 ATRXP46100 2492 aa5.69□□□□□ -1.5
CDC42BPA-209ENST00000448940 MYO1GB0I1T2 1018 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CILPO75339 1184 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 TULP3O75386 442 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 ECI2O75521 394 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 THEGLP0DJG4 465 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 PTK6Q13882 451 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 BOP1Q14137 746 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 DEFB109BQ30KR1 87 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZNF542PQ5EBM4 170 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 ABHD17BQ5VST6 288 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 LCLAT1Q6UWP7 414 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 RBMS3Q6XE24 437 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 PHC3Q8NDX5 983 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CMASQ8NFW8 434 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 SLC35C1Q96A29 364 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 AP2M1Q96CW1 435 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 PANX3Q96QZ0 392 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 UBR3Q6ZT12 1888 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 IGKV6-21A0A0C4DH24 114 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 VEGFDO43915 354 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 TNFSF15O95150 251 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 GLULP15104 373 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 SRP14P37108 136 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 RAB28P51157 221 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 ARL4CP56559 192 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 TMPRSS3P57727 454 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 GNA12Q03113 381 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 SOWAHAQ2M3V2 549 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 NPAS3Q8IXF0 933 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZCWPW1Q9H0M4 648 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 MAGEH1Q9H213 219 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZNF71Q9NQZ8 489 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 LMBRD1Q9NUN5 540 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 ARHGEF38Q9NXL2 777 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 GDAP2Q9NXN4 497 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 FIS1Q9Y3D6 152 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 TTC24A2A3L6 582 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 LINC01565O15544 149 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 PIGRP01833 764 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 NTSP30990 170 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 PCBP4P57723 403 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 SPDYAQ5MJ70 313 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CHST15Q7LFX5 561 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 LUZP2Q86TE4 346 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 SCAMP5Q8TAC9 235 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 ITFG1Q8TB96 612 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CASKIN2Q8WXE0 1202 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 SMPDL3BQ92485 455 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 PTPRN2Q92932 1015 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 MIOSQ9NXC5 875 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 SMARCAL1Q9NZC9 954 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 RAPGEFL1Q9UHV5 662 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 EIF3LQ9Y262 564 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 C1orf232A0A0U1RR37 186 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 TTI1O43156 1089 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 LMO2P25791 158 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 SMSP52788 366 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 PPP3CAQ08209 521 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 ITGA9Q13797 1035 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 BMPR2Q13873 1038 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 ERCC6LQ2NKX8 1250 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 FAM78AQ5JUQ0 283 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms