RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 GKP32189 559 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 ADRA1AP35348 466 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 KIR2DL1P43626 348 aaPredicted RBP19.73■□□□□ 0.75
SGCE-207ENST00000447873 CDK18Q07002 472 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 BCL2L1Q07817 233 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 MTM1Q13496 603 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 GRM3Q14832 879 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 FAM153CQ494X1 144 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 ZNF852Q6ZMS4 543 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 CEP128Q6ZU80 1094 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 CENPUQ71F23 418 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 ZNF534Q76KX8 674 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 OR52K1Q8NGK4 314 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 KCNV2Q8TDN2 545 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 FEM1CQ96JP0 617 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 TUBGCP5Q96RT8 1024 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 TDRD1Q9BXT4 1180 aaKnown RBP19.73■□□□□ 0.75
SGCE-207ENST00000447873 ZDHHC6Q9H6R6 413 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 ARHGEF3Q9NR81 526 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 CACNA2D2Q9NY47 1150 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 FBXL21Q9UKT6 434 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 STON1Q9Y6Q2 735 aa19.73■□□□□ 0.75
SGCE-207ENST00000447873 SHISA7A6NL88 538 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 WASH3PC4AMC7 463 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 AP3B1O00203 1094 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 PPFIA2O75334 1257 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 EPOP01588 193 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 EPHX1P07099 455 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 CD72P21854 359 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 PRKCHP24723 683 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 SERPINA4P29622 427 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 PRKCQQ04759 706 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 CDH17Q12864 832 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 C2orf27AQ580R0 203 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 FNBP1LQ5T0N5 605 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 EMBQ6PCB8 327 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 RANBP10Q6VN20 620 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 CAMK1DQ8IU85 385 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 CHST14Q8NCH0 376 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 AENQ8WTP8 325 aaKnown RBP19.72■□□□□ 0.75
SGCE-207ENST00000447873 PDCD6IPQ8WUM4 868 aaKnown RBP19.72■□□□□ 0.75
SGCE-207ENST00000447873 HEPHQ9BQS7 1158 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 CPEB1Q9BZB8 566 aaKnown RBP19.72■□□□□ 0.75
SGCE-207ENST00000447873 CASS4Q9NQ75 786 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 PIH1D1Q9NWS0 290 aaKnown RBP19.72■□□□□ 0.75
SGCE-207ENST00000447873 WNT16Q9UBV4 365 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 SUN2Q9UH99 717 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 CHKBQ9Y259 395 aa19.72■□□□□ 0.75
SGCE-207ENST00000447873 ARIH1Q9Y4X5 557 aaPredicted RBP19.72■□□□□ 0.75
SGCE-207ENST00000447873 LOC285095A0A1B0GVY8 99 aa19.71■□□□□ 0.75
SGCE-207ENST00000447873 SOCS5O75159 536 aa19.71■□□□□ 0.75
SGCE-207ENST00000447873 TRAF2Q12933 501 aa19.71■□□□□ 0.75
SGCE-207ENST00000447873 SLC1A5Q15758 541 aa19.71■□□□□ 0.75
SGCE-207ENST00000447873 BBS9Q3SYG4 887 aa19.71■□□□□ 0.75
SGCE-207ENST00000447873 FBXO43Q4G163 708 aa19.71■□□□□ 0.75
SGCE-207ENST00000447873 C9orf64Q5T6V5 341 aa19.71■□□□□ 0.75
SGCE-207ENST00000447873 UBALD2Q8IYN6 164 aa19.71■□□□□ 0.75
SGCE-207ENST00000447873 SLC25A41Q8N5S1 370 aa19.71■□□□□ 0.75
SGCE-207ENST00000447873 PAF1Q8N7H5 531 aa19.71■□□□□ 0.75
SGCE-207ENST00000447873 NDRG2Q9UN36 371 aaKnown RBP19.71■□□□□ 0.75
SGCE-207ENST00000447873 SIN3BO75182 1162 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 PIGNO95427 931 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 NDST3O95803 873 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 HLA-DPA1P20036 260 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 WASP42768 502 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 SESN2P58004 480 aaPredicted RBP19.7■□□□□ 0.74
SGCE-207ENST00000447873 DHX9Q08211 1270 aaKnown RBP19.7■□□□□ 0.74
SGCE-207ENST00000447873 PDIA2Q13087 525 aaKnown RBP19.7■□□□□ 0.74
SGCE-207ENST00000447873 ENPP2Q13822 863 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 SLMAPQ14BN4 828 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 MSS51Q4VC12 460 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 DNAJC21Q5F1R6 531 aaKnown RBP19.7■□□□□ 0.74
SGCE-207ENST00000447873 ARMC12Q5T9G4 340 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 SDE2Q6IQ49 451 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 GJD3Q8N144 294 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 GRIN3AQ8TCU5 1115 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 ADGRE3Q9BY15 652 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 SAYSD1Q9NPB0 183 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 BFARQ9NZS9 450 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 IL36AQ9UHA7 158 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 PCDHB9Q9Y5E1 797 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 EIF3HO15372 352 aaKnown RBP eCLIP19.7■□□□□ 0.74
SGCE-207ENST00000447873 PDHA1P08559 390 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 NTSR1P30989 418 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 MAGEA3P43357 314 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 CHRNA4P43681 627 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 MRPS21P82921 87 aaKnown RBP19.7■□□□□ 0.74
SGCE-207ENST00000447873 CCINQ13939 588 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 GALNT3Q14435 633 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 ELAVL3Q14576 367 aaKnown RBP19.7■□□□□ 0.74
SGCE-207ENST00000447873 SIRPB2Q5JXA9 342 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 TRMT11Q7Z4G4 463 aaKnown RBP19.7■□□□□ 0.74
SGCE-207ENST00000447873 HNRNPLLQ8WVV9 542 aaKnown RBP19.7■□□□□ 0.74
SGCE-207ENST00000447873 OR8D1Q8WZ84 308 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 RMDN1Q96DB5 314 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 SHDQ96IW2 340 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 LRIG1Q96JA1 1093 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 ZNF641Q96N77 438 aaPredicted RBP19.7■□□□□ 0.74
SGCE-207ENST00000447873 TRIB3Q96RU7 358 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 PHACTR1Q9C0D0 580 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms