RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 ZNF776Q68DI1 518 aaPredicted RBP12.67□□□□□ -0.38
SSR4-205ENST00000447375 CCDC170Q8IYT3 715 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 DCAF4L2Q8NA75 395 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 OR7D4Q8NG98 312 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 ZNF564Q8TBZ8 553 aaPredicted RBP12.67□□□□□ -0.38
SSR4-205ENST00000447375 FRS2Q8WU20 508 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 SERAC1Q96JX3 654 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 BTBD6Q96KE9 485 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 SNRNP25Q9BV90 132 aaKnown RBP12.67□□□□□ -0.38
SSR4-205ENST00000447375 PABPC3Q9H361 631 aaKnown RBP12.67□□□□□ -0.38
SSR4-205ENST00000447375 MTG2Q9H4K7 406 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 DHX35Q9H5Z1 703 aaKnown RBP12.67□□□□□ -0.38
SSR4-205ENST00000447375 GPATCH2LQ9NWQ4 482 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 FBXL12Q9NXK8 326 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 CTTNBP2NLQ9P2B4 639 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 INTUQ9ULD6 942 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 SCML1Q9UN30 329 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 SATB2Q9UPW6 733 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 HS3ST2Q9Y278 367 aa12.67□□□□□ -0.38
SSR4-205ENST00000447375 BOD1L1Q8NFC6 3051 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 EDDM13A0A1B0GTR0 161 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 CXorf51AA0A1B0GTR3 108 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 LRRC72A6NJI9 287 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 ENO4A6NNW6 628 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 FGF10O15520 208 aaPredicted RBP12.66□□□□□ -0.38
SSR4-205ENST00000447375 CREB3O43889 395 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 SNAP91O60641 907 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 SIN3BO75182 1162 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 ZMPSTE24O75844 475 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 MT-CO1P00395 513 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 TCF4P15884 667 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 ETFBP38117 255 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 HCAR3P49019 387 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 NUMBP49757 651 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 ZNF135P52742 658 aaPredicted RBP12.66□□□□□ -0.38
SSR4-205ENST00000447375 TLE1Q04724 770 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 SLC20A2Q08357 652 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 SFSWAPQ12872 951 aaKnown RBP12.66□□□□□ -0.38
SSR4-205ENST00000447375 TCEAL1Q15170 157 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 HS1BP3Q53T59 392 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 C3orf38Q5JPI3 329 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 IGF2-ASQ6U949 168 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 SPATS2Q86XZ4 545 aaKnown RBP12.66□□□□□ -0.38
SSR4-205ENST00000447375 SH2D3CQ8N5H7 860 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 RTL3Q8N8U3 475 aaKnown RBP12.66□□□□□ -0.38
SSR4-205ENST00000447375 OR2T34Q8NGX1 318 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 SLC35G2Q8TBE7 412 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 PTPRN2Q92932 1015 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 SLC46A1Q96NT5 459 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 FAM129BQ96TA1 746 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 SPON2Q9BUD6 331 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 RSPH9Q9H1X1 276 aaPredicted RBP12.66□□□□□ -0.38
SSR4-205ENST00000447375 MAGEH1Q9H213 219 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 NEUROG2Q9H2A3 272 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 NOL6Q9H6R4 1146 aaKnown RBP12.66□□□□□ -0.38
SSR4-205ENST00000447375 CATSPERBQ9H7T0 1116 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 DONSONQ9NYP3 566 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 IMPACTQ9P2X3 320 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 DNAI1Q9UI46 699 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 LCMT1Q9UIC8 334 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 VPS51Q9UID3 782 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 SLC25A13Q9UJS0 675 aa12.66□□□□□ -0.38
SSR4-205ENST00000447375 RAMP2O60895 175 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 MTA2O94776 668 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 PROSCO94903 275 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 SFTPCP11686 197 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 SRCP12931 536 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 ACVRL1P37023 503 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 CCR5P51681 352 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 INHBCP55103 352 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 YBEYP58557 167 aaPredicted RBP12.65□□□□□ -0.38
SSR4-205ENST00000447375 TPI1P60174 286 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 SLC25A11Q02978 314 aaKnown RBP12.65□□□□□ -0.38
SSR4-205ENST00000447375 POLD3Q15054 466 aaPredicted RBP12.65□□□□□ -0.38
SSR4-205ENST00000447375 DLG2Q15700 870 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 DPYSL2Q16555 572 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 TMTC1Q8IUR5 882 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 UMODL1-AS1Q8N2C9 162 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 SLC25A45Q8N413 288 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 MFSD2AQ8NA29 543 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 TEKT4Q8WW24 435 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 ARHGEF2Q92974 986 aaKnown RBP12.65□□□□□ -0.38
SSR4-205ENST00000447375 CCNL2Q96S94 520 aaPredicted RBP12.65□□□□□ -0.38
SSR4-205ENST00000447375 KCTD15Q96SI1 283 aaPredicted RBP12.65□□□□□ -0.38
SSR4-205ENST00000447375 ABCG4Q9H172 646 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 KCNK4Q9NYG8 393 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.65□□□□□ -0.38
SSR4-205ENST00000447375 CWC15Q9P013 229 aaKnown RBP12.65□□□□□ -0.38
SSR4-205ENST00000447375 SERGEFQ9UGK8 458 aa12.65□□□□□ -0.38
SSR4-205ENST00000447375 A0A1W2PP55 124 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 K7ERQ8 282 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 EFSO43281 561 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 MAGEC1O60732 1142 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 RNASEH2AO75792 299 aaKnown RBP12.64□□□□□ -0.39
SSR4-205ENST00000447375 RARAP10276 462 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 VAV1P15498 845 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 MAN1A1P33908 653 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 ARHGAP25P42331 645 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 MAGEA1P43355 309 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 CLCN6P51797 869 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms