RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 HEMGNQ9BXL5 484 aa12.06□□□□□ -0.48
RFC4-208ENST00000447345 CEP41Q9BYV8 373 aa12.06□□□□□ -0.48
RFC4-208ENST00000447345 SCUBE2Q9NQ36 999 aa12.06□□□□□ -0.48
RFC4-208ENST00000447345 SEPT10Q9P0V9 454 aa12.06□□□□□ -0.48
RFC4-208ENST00000447345 SAE1Q9UBE0 346 aaPredicted RBP12.06□□□□□ -0.48
RFC4-208ENST00000447345 SUSD2Q9UGT4 822 aa12.06□□□□□ -0.48
RFC4-208ENST00000447345 AMFRQ9UKV5 643 aa12.06□□□□□ -0.48
RFC4-208ENST00000447345 TDRD6O60522 2096 aaKnown RBP12.06□□□□□ -0.48
RFC4-208ENST00000447345 A0A1B0GTW7 788 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 A0A1W2PQU0 124 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 CCDC66A2RUB6 948 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 KCNK1O00180 336 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 NEMP1O14524 444 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 BCAT2O15382 392 aaPredicted RBP12.05□□□□□ -0.48
RFC4-208ENST00000447345 KRT86O43790 486 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 PRKCGP05129 697 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 PRLRP16471 622 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 ZFXP17010 805 aaPredicted RBP12.05□□□□□ -0.48
RFC4-208ENST00000447345 ITIH2P19823 946 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 XPAP23025 273 aaPredicted RBP12.05□□□□□ -0.48
RFC4-208ENST00000447345 CD27P26842 260 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 SERPINA4P29622 427 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 DPP6P42658 865 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 RENBPP51606 427 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 RWDD2BP57060 319 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 IRX4P78413 519 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 SEMG2Q02383 582 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 LMNB2Q03252 620 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 CCDC15Q0P6D6 951 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 AP1B1Q10567 949 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 ZNF211Q13398 564 aaPredicted RBP12.05□□□□□ -0.48
RFC4-208ENST00000447345 TFDP2Q14188 446 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 TAZQ16635 292 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 DUOXA1Q1HG43 343 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 SEL1L3Q68CR1 1132 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 CCDC13Q8IYE1 715 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 OR2I1PQ8NGU4 316 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 PDCD6IPQ8WUM4 868 aaKnown RBP12.05□□□□□ -0.48
RFC4-208ENST00000447345 ALG3Q92685 438 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 NSMCE3Q96MG7 304 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 MGME1Q9BQP7 344 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 HERPUD2Q9BSE4 406 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 NUSAP1Q9BXS6 441 aaKnown RBP12.05□□□□□ -0.48
RFC4-208ENST00000447345 SUV39H2Q9H5I1 410 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 ATP13A3Q9H7F0 1226 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 EBF2Q9HAK2 575 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 PREBQ9HCU5 417 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 TM9SF3Q9HD45 589 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 FZD3Q9NPG1 666 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 AASDHPPTQ9NRN7 309 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 PCDHA3Q9Y5H8 950 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 FADS3Q9Y5Q0 445 aa12.05□□□□□ -0.48
RFC4-208ENST00000447345 A0A1W2PPC4 97 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 PPP1R12AO14974 1030 aaPredicted RBP12.04□□□□□ -0.48
RFC4-208ENST00000447345 MATN3O15232 486 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 SLC31A1O15431 190 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 SPINT1O43278 529 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 HLA-DQB2P05538 268 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 CCNB1P14635 433 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 ENGP17813 658 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 TGM2P21980 687 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 CCNCP24863 283 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 HOXD12P35452 270 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 HSPA9P38646 679 aaKnown RBP12.04□□□□□ -0.48
RFC4-208ENST00000447345 CSNK1EP49674 416 aaKnown RBP12.04□□□□□ -0.48
RFC4-208ENST00000447345 CCR5P51681 352 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 AP1S1P61966 158 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 DSC2Q02487 901 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 BCL2L1Q07817 233 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 PPIDQ08752 370 aaKnown RBP12.04□□□□□ -0.48
RFC4-208ENST00000447345 ZBTB17Q13105 803 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 PDK1Q15118 436 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 CCDC181Q5TID7 509 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 SLC23A3Q6PIS1 610 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 RABEPKQ7Z6M1 372 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 ADAT2Q7Z6V5 191 aaKnown RBP12.04□□□□□ -0.48
RFC4-208ENST00000447345 TTC7BQ86TV6 843 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 ZC3H18Q86VM9 953 aaKnown RBP12.04□□□□□ -0.48
RFC4-208ENST00000447345 TRIM69Q86WT6 500 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 ZSWIM9Q86XI8 627 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 LRRC49Q8IUZ0 686 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 UBL4BQ8N7F7 174 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 CEP76Q8TAP6 659 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 SERAC1Q96JX3 654 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 OLFM3Q96PB7 478 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 NUDCD1Q96RS6 583 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 TUBGCP5Q96RT8 1024 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 SEMA3CQ99985 751 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 ORAI3Q9BRQ5 295 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 WRAP53Q9BUR4 548 aaKnown RBP12.04□□□□□ -0.48
RFC4-208ENST00000447345 CPEB1Q9BZB8 566 aaKnown RBP12.04□□□□□ -0.48
RFC4-208ENST00000447345 KDM4CQ9H3R0 1056 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 NOD2Q9HC29 1040 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 RBM22Q9NW64 420 aaKnown RBP eCLIP12.04□□□□□ -0.48
RFC4-208ENST00000447345 SLC6A14Q9UN76 642 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 CA5BQ9Y2D0 317 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 ASCC3Q8N3C0 2202 aaKnown RBP12.04□□□□□ -0.48
RFC4-208ENST00000447345 KNL1Q8NG31 2342 aa12.04□□□□□ -0.48
RFC4-208ENST00000447345 A0A1B0GVT2 93 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 UPK3BL1B0FP48 263 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms