RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ARID5AQ03989 594 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 ZNF234Q14588 700 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 CEBPEQ15744 281 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 PDLIM3Q53GG5 364 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-205ENST00000447267 SLC45A4Q5BKX6 768 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 CPZQ66K79 652 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 JMJD6Q6NYC1 403 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-205ENST00000447267 LINGO4Q6UY18 593 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 TPGS1Q6ZTW0 290 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 PIK3AP1Q6ZUJ8 805 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 ZNF589Q86UQ0 364 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-205ENST00000447267 ITPRIPQ8IWB1 547 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 NUDT10Q8NFP7 164 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 OR2T3Q8NH03 318 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 CHTF18Q8WVB6 975 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 ITLN2Q8WWU7 325 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-205ENST00000447267 KCTD13Q8WZ19 329 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 GTF3C6Q969F1 213 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 NUDT11Q96G61 164 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 FAM227BQ96M60 508 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 WWC2-AS2Q96NR7 200 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 CCDC3Q9BQI4 270 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 USP29Q9HBJ7 922 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 SGK2Q9HBY8 427 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 SLC6A20Q9NP91 592 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 RIC8AQ9NPQ8 531 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 PLK2Q9NYY3 685 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 TUBGCP4Q9UGJ1 667 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 SERGEFQ9UGK8 458 aa5.19□□□□□ -1.58
SDCBP-205ENST00000447267 MRPS18BQ9Y676 258 aaKnown RBP5.19□□□□□ -1.58
SDCBP-205ENST00000447267 TP53BP1Q12888 1972 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-205ENST00000447267 COL27A1Q8IZC6 1860 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-205ENST00000447267 DIDO1Q9BTC0 2240 aaKnown RBP5.18□□□□□ -1.58
SDCBP-205ENST00000447267 HIP1O00291 1037 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 PPEF2O14830 753 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 SCAMP1O15126 338 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 RFPL1O75677 317 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 NOL4O94818 638 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 KLHL18O94889 574 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 RTN3O95197 1032 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-205ENST00000447267 FOSP01100 380 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-205ENST00000447267 CYP3A4P08684 503 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 TYRP14679 529 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 TCN2P20062 427 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 CDK11BP21127 795 aaKnown RBP5.18□□□□□ -1.58
SDCBP-205ENST00000447267 ACO1P21399 889 aaKnown RBP5.18□□□□□ -1.58
SDCBP-205ENST00000447267 CYP2F1P24903 491 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 HARS2P49590 506 aaKnown RBP5.18□□□□□ -1.58
SDCBP-205ENST00000447267 NT5C2P49902 561 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 GUCY2FP51841 1108 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 CCL7P80098 99 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 SLC7A9P82251 487 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 POU5F1BQ06416 359 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 SPAG1Q07617 926 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 ENPP2Q13822 863 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 MXD4Q14582 209 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-205ENST00000447267 DEFB133Q30KQ1 61 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 XKR9Q5GH70 373 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 XKR4Q5GH76 650 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 LRCH2Q5VUJ6 765 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 NAPEPLDQ6IQ20 393 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 DTX3Q8N9I9 347 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 CRYGNQ8WXF5 182 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 TMEM158Q8WZ71 300 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 C14orf79Q96F83 325 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 C18orf12Q96KH6 178 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 CLIC6Q96NY7 704 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 BBS2Q9BXC9 721 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 TEKT3Q9BXF9 490 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 SPZ1Q9BXG8 430 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 TRIM55Q9BYV6 548 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 MEGF9Q9H1U4 602 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 CDT1Q9H211 546 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 NEUROG2Q9H2A3 272 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 GPN2Q9H9Y4 310 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-205ENST00000447267 SLC38A7Q9NVC3 462 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 TBC1D14Q9P2M4 693 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 UXTQ9UBK9 157 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-205ENST00000447267 SNX14Q9Y5W7 946 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 MYOFQ9NZM1 2061 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 PTPRJQ12913 1337 aa5.18□□□□□ -1.58
SDCBP-205ENST00000447267 ABCA4P78363 2273 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 ZNF638Q14966 1978 aaKnown RBP5.17□□□□□ -1.58
SDCBP-205ENST00000447267 A0A0D9SFI3 127 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 LRRIQ4A6NIV6 560 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 PRODHO43272 600 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 EDIL3O43854 480 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 RAD1O60671 282 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 DNTTP04053 509 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 IRF1P10914 325 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 MBL2P11226 248 aaPredicted RBP5.17□□□□□ -1.58
SDCBP-205ENST00000447267 PDCP20941 246 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 CD82P27701 267 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 MAT2AP31153 395 aaKnown RBP5.17□□□□□ -1.58
SDCBP-205ENST00000447267 ARL2P36404 184 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 COPB1P53618 953 aaKnown RBP5.17□□□□□ -1.58
SDCBP-205ENST00000447267 PSMC5P62195 406 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 PPP2CBP62714 309 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 PPP2CAP67775 309 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 PRPF4BQ13523 1007 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms