RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ZMIZ2Q8NF64 920 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 SPATA22Q8NHS9 363 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 CCDC126Q96EE4 140 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 COQ10BQ9H8M1 238 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 GTSE1Q9NYZ3 720 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 SNX10Q9Y5X0 201 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 CEPT1Q9Y6K0 416 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 HEATR9A2RTY3 570 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 MBLAC1A4D2B0 266 aaPredicted RBP19.26■□□□□ 0.67
SDCBP-204ENST00000447182 ZNF23P17027 643 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 CDH2P19022 906 aaPredicted RBP19.26■□□□□ 0.67
SDCBP-204ENST00000447182 REP15Q6BDI9 236 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 BHLHA9Q7RTU4 235 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 AMIGO2Q86SJ2 522 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 FAM35AQ86V20 835 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 SPATA6LQ8N4H0 392 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 PCDH20Q8N6Y1 951 aaKnown RBP19.26■□□□□ 0.67
SDCBP-204ENST00000447182 CELF6Q96J87 481 aaKnown RBP19.26■□□□□ 0.67
SDCBP-204ENST00000447182 ELMO2Q96JJ3 720 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 DNAJC1Q96KC8 554 aaKnown RBP19.26■□□□□ 0.67
SDCBP-204ENST00000447182 EML4Q9HC35 981 aaKnown RBP19.26■□□□□ 0.67
SDCBP-204ENST00000447182 TRPC7Q9HCX4 862 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 SPAG4Q9NPE6 437 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 IGSF5Q9NSI5 407 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 TREX1Q9NSU2 369 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 CD300AQ9UGN4 299 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 IPO11Q9UI26 975 aaKnown RBP19.26■□□□□ 0.67
SDCBP-204ENST00000447182 PLXNB2O15031 1838 aa19.26■□□□□ 0.67
SDCBP-204ENST00000447182 PSMD12O00232 456 aaPredicted RBP19.25■□□□□ 0.67
SDCBP-204ENST00000447182 FBP2O00757 339 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 SLC7A1P30825 629 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 ADRA1AP35348 466 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 BAG6P46379 1132 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 GALNT1Q10472 559 aaPredicted RBP19.25■□□□□ 0.67
SDCBP-204ENST00000447182 TECRLQ5HYJ1 363 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 KLC3Q6P597 504 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 PAOXQ6QHF9 649 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 HACD2Q6Y1H2 254 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 ARRDC4Q8NCT1 418 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 OR6J1Q8NGC5 347 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 TMEM40Q8WWA1 233 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 IL12RB2Q99665 862 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 CIDEBQ9UHD4 219 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 COL4A4P53420 1690 aaPredicted RBP19.25■□□□□ 0.67
SDCBP-204ENST00000447182 ARHGEF37A1IGU5 675 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 UBDO15205 165 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 MT-CYBP00156 380 aaPredicted RBP19.25■□□□□ 0.67
SDCBP-204ENST00000447182 HNRNPLP14866 589 aaKnown RBP eCLIP19.25■□□□□ 0.67
SDCBP-204ENST00000447182 PAMP19021 973 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 SLC5A2P31639 672 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 RABGGTBP53611 331 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 HPCAP84074 193 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 PFKPQ01813 784 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 FASTKQ14296 549 aaKnown RBP19.25■□□□□ 0.67
SDCBP-204ENST00000447182 SNX17Q15036 470 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 NRF1Q16656 503 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 KIAA0930Q6ICG6 404 aaPredicted RBP19.25■□□□□ 0.67
SDCBP-204ENST00000447182 FAM45BPQ6NSW5 357 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 DEFB132Q7Z7B7 95 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 TSPAN14Q8NG11 270 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 FAM45AQ8TCE6 357 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 USP33Q8TEY7 942 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 LRTOMTQ8WZ04 291 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 LPGAT1Q92604 370 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 SLCO4A1Q96BD0 722 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 PPP1R2P1Q96PQ5 205 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 PCDHAC1Q9H158 963 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 GLOD4Q9HC38 313 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 IPPQ9Y573 584 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 AK5Q9Y6K8 562 aa19.25■□□□□ 0.67
SDCBP-204ENST00000447182 MYLKQ15746 1914 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 PRORSD1PA6NEY8 169 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 HHLA1C9JL84 531 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 TRPA1O75762 1119 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 IPO13O94829 963 aaKnown RBP19.24■□□□□ 0.67
SDCBP-204ENST00000447182 H6PDO95479 791 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 FAM83EQ2M2I3 478 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 TBC1D25Q3MII6 688 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 C8orf82Q6P1X6 216 aaPredicted RBP19.24■□□□□ 0.67
SDCBP-204ENST00000447182 KIAA0408Q6ZU52 694 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 SMG8Q8ND04 991 aaKnown RBP19.24■□□□□ 0.67
SDCBP-204ENST00000447182 GPRC5AQ8NFJ5 357 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 IPMKQ8NFU5 416 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 GTF3C2Q8WUA4 911 aaPredicted RBP19.24■□□□□ 0.67
SDCBP-204ENST00000447182 ENTPD7Q9NQZ7 604 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 TMEM30AQ9NV96 361 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 DDX18Q9NVP1 670 aaKnown RBP19.24■□□□□ 0.67
SDCBP-204ENST00000447182 TMEM181Q9P2C4 612 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 FBXO5Q9UKT4 447 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 NEU3Q9UQ49 428 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 SQORQ9Y6N5 450 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 NEMP2A6NFY4 417 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 FAM155AB1AL88 458 aaPredicted RBP19.24■□□□□ 0.67
SDCBP-204ENST00000447182 H3BSA7 217 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 TRMUO75648 421 aaKnown RBP19.24■□□□□ 0.67
SDCBP-204ENST00000447182 SMIM10L2AP0DMW4 78 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 SMIM10L2BP0DMW5 78 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 CDK4P11802 303 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 CPB1P15086 417 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 PCSK6P29122 969 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms