RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 NFKB1P19838 968 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 GKP32189 559 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 SNRPD1P62314 119 aaKnown RBP17.43■□□□□ 0.38
LIME1-202ENST00000444951 MRPS25P82663 173 aaKnown RBP17.43■□□□□ 0.38
LIME1-202ENST00000444951 DSC2Q02487 901 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 STARD3Q14849 445 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 EOGTQ5NDL2 527 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 ANKRD20A2Q5SQ80 823 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 STPG1Q5TH74 334 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 ANKRD20A1Q5TYW2 823 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 ANKRD20A3Q5VUR7 823 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 ANO7Q6IWH7 933 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 KIAA1211LQ6NV74 962 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 DPY19L3Q6ZPD9 716 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 ARHGEF18Q6ZSZ5 1173 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 RASSF3Q86WH2 238 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 GLIS1Q8NBF1 620 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 CHST14Q8NCH0 376 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 MDGA1Q8NFP4 955 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 OR2AP1Q8NGE2 309 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 GRIN3AQ8TCU5 1115 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 PTPRN2Q92932 1015 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 ISG20Q96AZ6 181 aaKnown RBP17.43■□□□□ 0.38
LIME1-202ENST00000444951 TEKT5Q96M29 485 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 SEMA3CQ99985 751 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 CARD6Q9BX69 1037 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 POLR1EQ9GZS1 481 aaKnown RBP17.43■□□□□ 0.38
LIME1-202ENST00000444951 ZDHHC6Q9H6R6 413 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 SCUBE2Q9NQ36 999 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 PRSS16Q9NQE7 514 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 HAUS2Q9NVX0 235 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 RSPH14Q9UHP6 348 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 MMP17Q9ULZ9 603 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 PCDHGA5Q9Y5G8 931 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 FOXD2O60548 495 aaPredicted RBP17.42■□□□□ 0.38
LIME1-202ENST00000444951 GSRP00390 522 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 STIP1P31948 543 aaKnown RBP17.42■□□□□ 0.38
LIME1-202ENST00000444951 ACTN2P35609 894 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 FNTAP49354 379 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 VPS41P49754 854 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 VASPP50552 380 aaPredicted RBP17.42■□□□□ 0.38
LIME1-202ENST00000444951 CCNHP51946 323 aaPredicted RBP17.42■□□□□ 0.38
LIME1-202ENST00000444951 TERF1P54274 439 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 ENPP2Q13822 863 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 C9orf64Q5T6V5 341 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 SRLQ86TD4 932 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 MNS1Q8NEH6 495 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 OR2A12Q8NGT7 310 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 SPATA13Q96N96 652 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 VAT1Q99536 393 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 GABRG3Q99928 467 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 MGME1Q9BQP7 344 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 GLOD4Q9HC38 313 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 AMACRQ9UHK6 382 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 TRHDEQ9UKU6 1024 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 ATP8A1Q9Y2Q0 1164 aa17.42■□□□□ 0.38
LIME1-202ENST00000444951 FARP1Q9Y4F1 1045 aaPredicted RBP17.42■□□□□ 0.38
LIME1-202ENST00000444951 GON4LQ3T8J9 2241 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 TARSL2A2RTX5 802 aaKnown RBP17.41■□□□□ 0.38
LIME1-202ENST00000444951 CTAGE15A4D2H0 777 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 C5orf60A6NFR6 353 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 ZNF189O75820 626 aaPredicted RBP17.41■□□□□ 0.38
LIME1-202ENST00000444951 ECEL1O95672 775 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 KRT14P02533 472 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 CTAGE8P0CG41 777 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 CD68P34810 354 aaPredicted RBP17.41■□□□□ 0.38
LIME1-202ENST00000444951 HSPA9P38646 679 aaKnown RBP17.41■□□□□ 0.38
LIME1-202ENST00000444951 DR1Q01658 176 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 CREB5Q02930 508 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 NIPAL4Q0D2K0 466 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 PPP1R7Q15435 360 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 ELF2Q15723 593 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 CRY1Q16526 586 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 MYLK3Q32MK0 819 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 POM121L1PQ3SYA9 428 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 HSF5Q4G112 596 aaPredicted RBP17.41■□□□□ 0.38
LIME1-202ENST00000444951 FAXCQ5TGI0 409 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 ITPRIPL1Q6GPH6 555 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 CTAGE6Q86UF2 777 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 CTAGE4Q8IX94 777 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 PAF1Q8N7H5 531 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 FRMD1Q8N878 549 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 GRK7Q8WTQ7 553 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 OR8D1Q8WZ84 308 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 RBM15Q96T37 977 aaKnown RBP eCLIP17.41■□□□□ 0.38
LIME1-202ENST00000444951 SLC6A17Q9H1V8 727 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 NOD2Q9HC29 1040 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 VPS45Q9NRW7 570 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 UBP1Q9NZI7 540 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 ZFHX4Q86UP3 3567 aa17.41■□□□□ 0.38
LIME1-202ENST00000444951 A0A1W2PQF6 199 aa17.4■□□□□ 0.38
LIME1-202ENST00000444951 TCRBV21S2A2A0A5A6 115 aa17.4■□□□□ 0.38
LIME1-202ENST00000444951 OPHN1O60890 802 aa17.4■□□□□ 0.38
LIME1-202ENST00000444951 GCATO75600 419 aa17.4■□□□□ 0.38
LIME1-202ENST00000444951 KRT37O76014 449 aa17.4■□□□□ 0.38
LIME1-202ENST00000444951 PIGNO95427 931 aa17.4■□□□□ 0.38
LIME1-202ENST00000444951 GAS8O95995 478 aa17.4■□□□□ 0.38
LIME1-202ENST00000444951 PSMB4P28070 264 aa17.4■□□□□ 0.38
LIME1-202ENST00000444951 RPL22P35268 128 aaKnown RBP17.4■□□□□ 0.38
LIME1-202ENST00000444951 CD86P42081 329 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms