RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 FAM27E3Q08E93 113 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 CAPSQ13938 189 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 LPIN1Q14693 890 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 TXNDC8Q6A555 127 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 Q6ZSV7 163 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 ZNF367Q7RTV3 350 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 C7orf57Q8NEG2 295 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 TMEM163Q8TC26 289 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 GPT2Q8TD30 523 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 KCNG4Q8TDN1 519 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 TMEM18Q96B42 140 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 RNF183Q96D59 192 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 PLAC1Q9HBJ0 212 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 SPATS2LQ9NUQ6 558 aaKnown RBP4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 TAS2R10Q9NYW0 307 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 MPP6Q9NZW5 540 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 NDRG3Q9UGV2 375 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 NPIPB15A6NHN6 443 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 TMEM63AO94886 807 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 SYF2O95926 243 aaKnown RBP4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 LCATP04180 440 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 ZNF8P17098 575 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 ICAM3P32942 547 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 ABCD1P33897 745 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 THPOP40225 353 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 CLCN5P51795 746 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 PMS2P54278 862 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 SIM2Q14190 667 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 ZNF284Q2VY69 593 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 C1orf122Q6ZSJ8 110 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 MAATS1Q7Z4T9 603 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 TBC1D1Q86TI0 1168 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 LURAP1LQ8IV03 231 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 DHX40Q8IX18 779 aaKnown RBP4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 KIAA2013Q8IYS2 634 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 TDRD7Q8NHU6 1098 aaKnown RBP4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 NOC3LQ8WTT2 800 aaKnown RBP4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 SCARB1Q8WTV0 552 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 SLC35F5Q8WV83 523 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 SNAPC3Q92966 411 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 C7orf26Q96N11 449 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 CDT1Q9H211 546 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 SMC4Q9NTJ3 1288 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 IRAK4Q9NWZ3 460 aa4.73□□□□□ -1.65
HMGB3P6-201ENST00000444896 A0A0U1RQF3 1178 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 MYMKA6NI61 221 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 HSPB2A8KAH6 182 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 B4DGG1 531 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 CHL1O00533 1208 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 TNFRSF13BO14836 293 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 KLK8O60259 260 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 SEC31AO94979 1220 aaKnown RBP4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 CCR9P51686 369 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 ZP1P60852 638 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 GRIK3Q13003 919 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 RNPS1Q15287 305 aaKnown RBP4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 HSPB2Q16082 182 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 SOWAHAQ2M3V2 549 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 NCAPH2Q6IBW4 605 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 FAM180BQ6P0A1 224 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 Q6ZTK2 550 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 RRM2BQ7LG56 351 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 TECPR1Q7Z6L1 1165 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 TBC1D26Q86UD7 250 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 NOXA1Q86UR1 476 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 DENND6AQ8IWF6 608 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 PPHLN1Q8NEY8 458 aaKnown RBP4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 METTL6Q8TCB7 284 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 SKA1Q96BD8 255 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 KLHL29Q96CT2 875 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 APOLD1Q96LR9 279 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 NUF2Q9BZD4 464 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 FAM234AQ9H0X4 552 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 PLEKHA4Q9H4M7 779 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 BRF2Q9HAW0 419 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 KRCC1Q9NPI7 259 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 ANKRD10Q9NXR5 420 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 AASSQ9UDR5 926 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 A4GNTQ9UNA3 340 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 CUX2O14529 1486 aa4.72□□□□□ -1.65
HMGB3P6-201ENST00000444896 DNMBPQ6XZF7 1577 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 FGD5Q6ZNL6 1462 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 ARAP1Q96P48 1450 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 FANCD2Q9BXW9 1451 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 RPS10-NUDT3A0A1W2PQS6 291 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 TYW5A2RUC4 315 aaKnown RBP4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 NPIPB11E5RHQ5 1161 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 H3BNX3 289 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 CYP1A2P05177 515 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 ITGAXP20702 1163 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 CPOXP36551 454 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 RFX2P48378 723 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 RXRGP48443 463 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 RUNX2Q13950 521 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 MYBPC2Q14324 1141 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 GPR18Q14330 331 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 TBCEQ15813 527 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 ESCO2Q56NI9 601 aa4.71□□□□□ -1.66
HMGB3P6-201ENST00000444896 PRAMEF19Q5SWL8 479 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms