RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 AP1B1Q10567 949 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 SLC10A2Q12908 348 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-211ENST00000443563 SLC23A3Q6PIS1 610 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 BRAT1Q6PJG6 821 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 BBS12Q6ZW61 710 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 PARS2Q7L3T8 475 aaKnown RBP10.96□□□□□ -0.65
HDAC6-211ENST00000443563 TRIM69Q86WT6 500 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 DCLK2Q8N568 766 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 PAF1Q8N7H5 531 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 TRIM58Q8NG06 486 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 SKA1Q96BD8 255 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 BIRC7Q96CA5 298 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 HES6Q96HZ4 224 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 FEM1CQ96JP0 617 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 OLFM3Q96PB7 478 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 FERMT1Q9BQL6 677 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 OSBPL8Q9BZF1 889 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 MIR1-1HGQ9H1L0 117 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 NT5MQ9NPB1 228 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 DMTF1Q9Y222 760 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 CAPN6Q9Y6Q1 641 aa10.96□□□□□ -0.65
HDAC6-211ENST00000443563 OTOGLQ3ZCN5 2332 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 ATXN2Q99700 1313 aaKnown RBP10.95□□□□□ -0.66
HDAC6-211ENST00000443563 A0A1W2PPC4 97 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 GOLGA6L9A6NEM1 432 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 HACD1B0YJ81 288 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 PLK4O00444 970 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 NEMP1O14524 444 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 INSIG1O15503 277 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 TSPAN6O43657 245 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 RNGTTO60942 597 aaKnown RBP10.95□□□□□ -0.66
HDAC6-211ENST00000443563 PCDH8O95206 1070 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 MAP3K6O95382 1288 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 SYPP08247 313 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 SERPINF2P08697 491 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 CA4P22748 312 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 AFF3P51826 1226 aaKnown RBP10.95□□□□□ -0.66
HDAC6-211ENST00000443563 TAS2R38P59533 333 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 IFI35P80217 286 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-211ENST00000443563 ARHGAP8P85298 464 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 LMNB2Q03252 620 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 XRCC4Q13426 336 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 TEAD4Q15561 434 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 AASDHQ4L235 1098 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-211ENST00000443563 SETMARQ53H47 684 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-211ENST00000443563 KIAA1161Q6NSJ0 714 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 ERAP2Q6P179 960 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 NPNTQ6UXI9 565 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 PRR23CQ6ZRP0 262 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 TTC7BQ86TV6 843 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 TFB1MQ8WVM0 346 aaKnown RBP10.95□□□□□ -0.66
HDAC6-211ENST00000443563 HAUS1Q96CS2 278 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 LGMNQ99538 433 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 HEMGNQ9BXL5 484 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 TMEM74BQ9NUR3 256 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 RBM22Q9NW64 420 aaKnown RBP eCLIP10.95□□□□□ -0.66
HDAC6-211ENST00000443563 EIF2B4Q9UI10 523 aaKnown RBP10.95□□□□□ -0.66
HDAC6-211ENST00000443563 SLC6A14Q9UN76 642 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 FADS3Q9Y5Q0 445 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 PLXNA2O75051 1894 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 PIEZO1Q92508 2521 aa10.95□□□□□ -0.66
HDAC6-211ENST00000443563 TSPAN11A1L157 253 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 MUSKO15146 869 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 BCAT2O15382 392 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-211ENST00000443563 DDX3YO15523 660 aaKnown RBP10.94□□□□□ -0.66
HDAC6-211ENST00000443563 LATO43561 262 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 PIGNO95427 931 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 JCHAINP01591 159 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 CFIP05156 583 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 IGHV4-34P06331 123 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 PYGMP11217 842 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 CR2P20023 1033 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 SDHBP21912 280 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 TGM1P22735 817 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 MSNP26038 577 aaKnown RBP10.94□□□□□ -0.66
HDAC6-211ENST00000443563 MAOBP27338 520 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 RGRP47804 291 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 RPS21P63220 83 aaKnown RBP10.94□□□□□ -0.66
HDAC6-211ENST00000443563 RACK1P63244 317 aaKnown RBP10.94□□□□□ -0.66
HDAC6-211ENST00000443563 CCDC173Q0VFZ6 552 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 RPS6KA1Q15418 735 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 CCDC6Q16204 474 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 SLC45A4Q5BKX6 768 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 TRIM61Q5EBN2 209 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 SEL1L2Q5TEA6 688 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 MEI1Q5TIA1 1274 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 ALG1LQ6GMV1 187 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 HORMAD1Q86X24 394 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 CAMK1DQ8IU85 385 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 KIAA2013Q8IYS2 634 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 NDUFAF2Q8N183 169 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 PGBD5Q8N414 524 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 TTC13Q8NBP0 860 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 ALG3Q92685 438 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 IL12RB2Q99665 862 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 ZDHHC5Q9C0B5 715 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 PARD6AQ9NPB6 346 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 PACSIN2Q9UNF0 486 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-211ENST00000443563 ATP8A1Q9Y2Q0 1164 aa10.94□□□□□ -0.66
HDAC6-211ENST00000443563 TTLL3Q9Y4R7 772 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms