RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 SMOC2Q9H3U7 446 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 RHOJQ9H4E5 214 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 ANGPT2O15123 496 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 KRT16P08779 473 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 ITGALP20701 1170 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 CRHR1P34998 444 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 IRF9Q00978 393 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 BIRC2Q13490 618 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 PTPRCAPQ14761 206 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 MS4A13Q5J8X5 152 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 TTC7BQ86TV6 843 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 DEFB107AQ8IZN7 70 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 DNAJC1Q96KC8 554 aaKnown RBP10.68□□□□□ -0.7
CALD1-210ENST00000443197 OSBPL2Q9H1P3 480 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 SLC25A51Q9H1U9 297 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 TNKS2Q9H2K2 1166 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 MID1IP1Q9NPA3 183 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 SLC25A13Q9UJS0 675 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 FCF1Q9Y324 198 aaKnown RBP10.68□□□□□ -0.7
CALD1-210ENST00000443197 DOCK3Q8IZD9 2030 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 HNRNPCL1O60812 293 aaKnown RBP10.68□□□□□ -0.7
CALD1-210ENST00000443197 USP1O94782 785 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 GJB5O95377 273 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 PROCP04070 461 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 ADH1AP07327 375 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 CSF2RAP15509 400 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 SYN1P17600 705 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 PBLDP30039 288 aaPredicted RBP10.68□□□□□ -0.7
CALD1-210ENST00000443197 ELF3P78545 371 aaPredicted RBP10.68□□□□□ -0.7
CALD1-210ENST00000443197 SLC25A3Q00325 362 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 DDX39BQ13838 428 aaKnown RBP10.68□□□□□ -0.7
CALD1-210ENST00000443197 TCHHL1Q5QJ38 904 aaPredicted RBP10.68□□□□□ -0.7
CALD1-210ENST00000443197 TMTC4Q5T4D3 741 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 YTHDF3Q7Z739 585 aaKnown RBP10.68□□□□□ -0.7
CALD1-210ENST00000443197 PIP4K2CQ8TBX8 421 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 KHSRPQ92945 711 aaKnown RBP eCLIP10.68□□□□□ -0.73e-7■■■□□ 14.6
CALD1-210ENST00000443197 RBBP8Q99708 897 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 MRPL46Q9H2W6 279 aaKnown RBP10.68□□□□□ -0.7
CALD1-210ENST00000443197 SYTL2Q9HCH5 934 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 SEMA4BQ9NPR2 832 aaPredicted RBP10.68□□□□□ -0.7
CALD1-210ENST00000443197 MTMR10Q9NXD2 777 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 CCDC167Q9P0B6 97 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 EVLQ9UI08 416 aaPredicted RBP10.68□□□□□ -0.7
CALD1-210ENST00000443197 TAGLN3Q9UI15 199 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 VWA7Q9Y334 891 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 V9GYQ6 96 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 C1orf232A0A0U1RR37 186 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 CLDN11O75508 207 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 ATP6V1G2O95670 118 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 FAM163BP0C2L3 166 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 TPBGLP0DKB5 382 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 PRKAA1Q13131 559 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 NAB1Q13506 487 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 RNF43Q68DV7 783 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 SCIMPQ6UWF3 145 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 CDHR3Q6ZTQ4 885 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 NECAB2Q7Z6G3 386 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 SCUBE1Q8IWY4 988 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 GSTCDQ8NEC7 633 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 ACMSDQ8TDX5 336 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 BBS2Q9BXC9 721 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 ASB8Q9H765 288 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 WWOXQ9NZC7 414 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 COPG2Q9UBF2 871 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 ARHGAP26Q9UNA1 814 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 AURKCQ9UQB9 309 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 SCML2Q9UQR0 700 aa10.68□□□□□ -0.7
CALD1-210ENST00000443197 A0A0D9SEW6 157 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 A0A1W2PRU2 124 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 A8MUI8 341 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 KPNA3O00505 521 aaPredicted RBP10.67□□□□□ -0.7
CALD1-210ENST00000443197 CD3EAPO15446 510 aaKnown RBP10.67□□□□□ -0.7
CALD1-210ENST00000443197 ENTPD5O75356 428 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 LMNAP02545 664 aaKnown RBP10.67□□□□□ -0.7
CALD1-210ENST00000443197 HAPLN1P10915 354 aaPredicted RBP10.67□□□□□ -0.7
CALD1-210ENST00000443197 HOXD8P13378 290 aaPredicted RBP10.67□□□□□ -0.7
CALD1-210ENST00000443197 CDK7P50613 346 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 LIMK2P53671 638 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 NCALDP61601 193 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 GALNT2Q10471 571 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 KRT33BQ14525 404 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 AGKQ53H12 422 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 ATXN7L2Q5T6C5 722 aaPredicted RBP10.67□□□□□ -0.7
CALD1-210ENST00000443197 CNSTQ6PJW8 725 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 PIGWQ7Z7B1 504 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 MRPL10Q7Z7H8 261 aaKnown RBP10.67□□□□□ -0.7
CALD1-210ENST00000443197 SUGP1Q8IWZ8 645 aaKnown RBP10.67□□□□□ -0.7
CALD1-210ENST00000443197 TSEN34Q9BSV6 310 aaKnown RBP10.67□□□□□ -0.7
CALD1-210ENST00000443197 UPF3AQ9H1J1 476 aaKnown RBP10.67□□□□□ -0.7
CALD1-210ENST00000443197 PLA2G4CQ9UP65 541 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 TRAV19A0A0A6YYK7 116 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 NEMP2A6NFY4 417 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 PRR5-ARHGAP8B1AHC4 643 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 DCLK1O15075 740 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 SNAP91O60641 907 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 PLIN3O60664 434 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 TAS2R39P59534 338 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 ARHGAP8P85298 464 aa10.67□□□□□ -0.7
CALD1-210ENST00000443197 BOP1Q14137 746 aaKnown RBP10.67□□□□□ -0.7
CALD1-210ENST00000443197 PARP15Q460N3 678 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms