RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 OR6C4Q8NGE1 309 aa13.99□□□□□ -0.17
PTPRE-203ENST00000442830 FAM172AQ8WUF8 416 aa13.99□□□□□ -0.17
PTPRE-203ENST00000442830 SNRNP27Q8WVK2 155 aaKnown RBP13.99□□□□□ -0.17
PTPRE-203ENST00000442830 CENPTQ96BT3 561 aa13.99□□□□□ -0.17
PTPRE-203ENST00000442830 EPAS1Q99814 870 aa13.99□□□□□ -0.17
PTPRE-203ENST00000442830 SELENOOQ9BVL4 669 aa13.99□□□□□ -0.17
PTPRE-203ENST00000442830 CPEB1Q9BZB8 566 aaKnown RBP13.99□□□□□ -0.17
PTPRE-203ENST00000442830 TTYH3Q9C0H2 523 aa13.99□□□□□ -0.17
PTPRE-203ENST00000442830 CHMP5Q9NZZ3 219 aa13.99□□□□□ -0.17
PTPRE-203ENST00000442830 DNAI1Q9UI46 699 aa13.99□□□□□ -0.17
PTPRE-203ENST00000442830 DOLKQ9UPQ8 538 aa13.99□□□□□ -0.17
PTPRE-203ENST00000442830 GTF3C3Q9Y5Q9 886 aa13.99□□□□□ -0.17
PTPRE-203ENST00000442830 CPED1A4D0V7 1026 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 EIF3CLB5ME19 914 aaKnown RBP13.98□□□□□ -0.17
PTPRE-203ENST00000442830 FGF10O15520 208 aaPredicted RBP13.98□□□□□ -0.17
PTPRE-203ENST00000442830 BUB1O43683 1085 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 GFPT2O94808 682 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 TMCC1O94876 653 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 RHOAP61586 193 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 FMO1Q01740 532 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 PPARDQ03181 441 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 EIF3IQ13347 325 aaKnown RBP13.98□□□□□ -0.17
PTPRE-203ENST00000442830 DEFB133Q30KQ1 61 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 TAF1BQ53T94 588 aaPredicted RBP13.98□□□□□ -0.17
PTPRE-203ENST00000442830 C2CD6Q53TS8 623 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 PRRT3Q5FWE3 981 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 SLFN11Q7Z7L1 901 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 EMC1Q8N766 993 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 C3orf20Q8ND61 904 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 WDR36Q8NI36 951 aaKnown RBP13.98□□□□□ -0.17
PTPRE-203ENST00000442830 ENOX1Q8TC92 643 aaKnown RBP13.98□□□□□ -0.17
PTPRE-203ENST00000442830 KLHL32Q96NJ5 620 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 EIF3CQ99613 913 aaKnown RBP13.98□□□□□ -0.17
PTPRE-203ENST00000442830 NCAPGQ9BPX3 1015 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 C11orf70Q9BRQ4 267 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 GANQ9H2C0 597 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 ASCL3Q9NQ33 180 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 ADAM22Q9P0K1 906 aa13.98□□□□□ -0.17
PTPRE-203ENST00000442830 COL27A1Q8IZC6 1860 aaPredicted RBP13.97□□□□□ -0.17
PTPRE-203ENST00000442830 WASH4PA8MWX3 477 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 RNF103O00237 685 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 CCDC172P0C7W6 258 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 GPD1P21695 349 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 EPHB2P29323 1055 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 IGFALSP35858 605 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 HDAC4P56524 1084 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 JAM2P57087 298 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 POLR2FP61218 127 aaKnown RBP13.97□□□□□ -0.17
PTPRE-203ENST00000442830 CFHR1Q03591 330 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 EIF2B5Q13144 721 aaKnown RBP13.97□□□□□ -0.17
PTPRE-203ENST00000442830 SPIDRQ14159 915 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 C15orf59Q2T9L4 293 aaPredicted RBP13.97□□□□□ -0.17
PTPRE-203ENST00000442830 C3orf38Q5JPI3 329 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 CFAP58Q5T655 872 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 FAXCQ5TGI0 409 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 ERAP2Q6P179 960 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 GUSBP11Q6P575 273 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 BRAT1Q6PJG6 821 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 ZNF605Q86T29 641 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 DNAAF5Q86Y56 855 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 PHF13Q86YI8 300 aaPredicted RBP13.97□□□□□ -0.17
PTPRE-203ENST00000442830 ARL10Q8N8L6 244 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 OR6K2Q8NGY2 324 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 VCPIP1Q96JH7 1222 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 SLC46A1Q96NT5 459 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 SATB2Q9UPW6 733 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 NEU3Q9UQ49 428 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 MGAQ8IWI9 3026 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 LRRK1Q38SD2 2015 aa13.97□□□□□ -0.17
PTPRE-203ENST00000442830 CCDC187A0A096LP49 1063 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 CFAP69A5D8W1 941 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 SIGLEC16A6NMB1 481 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 KLK10O43240 276 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 SPINT1O43278 529 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 RASGRP1O95267 797 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 UNGP13051 313 aaPredicted RBP13.96□□□□□ -0.17
PTPRE-203ENST00000442830 TGM2P21980 687 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 EIF4A3P38919 411 aaKnown RBP13.96□□□□□ -0.17
PTPRE-203ENST00000442830 VAC14Q08AM6 782 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 LRRC14Q15048 493 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 AGERQ15109 404 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 TMEM52BQ4KMG9 183 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 HSP90AA4PQ58FG1 418 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 VPS36Q86VN1 386 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 GKN2Q86XP6 184 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 GPT2Q8TD30 523 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 SLC20A1Q8WUM9 679 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 LIN37Q96GY3 246 aaPredicted RBP13.96□□□□□ -0.17
PTPRE-203ENST00000442830 ZNF641Q96N77 438 aaPredicted RBP13.96□□□□□ -0.17
PTPRE-203ENST00000442830 TUBGCP5Q96RT8 1024 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 LRRC61Q9BV99 259 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 STRADBQ9C0K7 418 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 SAMSN1Q9NSI8 373 aaKnown RBP13.96□□□□□ -0.17
PTPRE-203ENST00000442830 NDFIP2Q9NV92 336 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 KLF15Q9UIH9 416 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 PADI4Q9UM07 663 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 ITM2BQ9Y287 266 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 ENTPD2Q9Y5L3 495 aa13.96□□□□□ -0.17
PTPRE-203ENST00000442830 KIF26BQ2KJY2 2108 aa13.96□□□□□ -0.18
PTPRE-203ENST00000442830 ANKRD36A6QL64 1941 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms