RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 FANCGO15287 622 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 LMNAP02545 664 aaKnown RBP16.19■□□□□ 0.18
USP39-205ENST00000442708 RBP3P10745 1247 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 ADRB3P13945 408 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 TIMP2P16035 220 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 DHPSP49366 369 aaPredicted RBP16.19■□□□□ 0.18
USP39-205ENST00000442708 NEK3P51956 506 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 AP1S1P61966 158 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 PPP2CBP62714 309 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 PPP2CAP67775 309 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 ITKQ08881 620 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 TRAF2Q12933 501 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 ELF2Q15723 593 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 C11orf74Q86VG3 221 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 BBS5Q8N3I7 341 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 NKD2Q969F2 451 aaPredicted RBP16.19■□□□□ 0.18
USP39-205ENST00000442708 ECHDC3Q96DC8 303 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 PPP1R16AQ96I34 528 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 HSPA12BQ96MM6 686 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 ZNF641Q96N77 438 aaPredicted RBP16.19■□□□□ 0.18
USP39-205ENST00000442708 AGAP3Q96P47 875 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 POLR1EQ9GZS1 481 aaKnown RBP16.19■□□□□ 0.18
USP39-205ENST00000442708 ATP13A3Q9H7F0 1226 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 DYRK4Q9NR20 520 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 DKK3Q9UBP4 350 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 AMACRQ9UHK6 382 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 ITM2BQ9Y287 266 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 TTLL3Q9Y4R7 772 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 SLCO1B1Q9Y6L6 691 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 OTOGLQ3ZCN5 2332 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 GOLGA6L9A6NEM1 432 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 PRR23AA6NEV1 266 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 METTL12A8MUP2 240 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 SLC7A4O43246 635 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 HTRA2O43464 458 aaPredicted RBP16.18■□□□□ 0.18
USP39-205ENST00000442708 CEP104O60308 925 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 RHOBTB1O94844 696 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 PRKCGP05129 697 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 IGHV4-34P06331 123 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 ITPKAP23677 461 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 MAOBP27338 520 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 CD68P34810 354 aaPredicted RBP16.18■□□□□ 0.18
USP39-205ENST00000442708 BCL2L1Q07817 233 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 SFSWAPQ12872 951 aaKnown RBP16.18■□□□□ 0.18
USP39-205ENST00000442708 GRM3Q14832 879 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 TEX44Q53QW1 395 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 LAIR1Q6GTX8 287 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 FBXL19Q6PCT2 694 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 ZNF567Q8N184 647 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 CADM4Q8NFZ8 388 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 OR2T34Q8NGX1 318 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 SLC35B2Q8TB61 432 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 HTR3CQ8WXA8 447 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 BIRC7Q96CA5 298 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 EBF2Q9HAK2 575 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 USP29Q9HBJ7 922 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 TMEM74BQ9NUR3 256 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.18■□□□□ 0.18
USP39-205ENST00000442708 FADS3Q9Y5Q0 445 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 USP34Q70CQ2 3546 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 RALGAPA1Q6GYQ0 2036 aa16.18■□□□□ 0.18
USP39-205ENST00000442708 TBC1D3DA0A087WVF3 549 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 TBC1D3IA0A087WXS9 549 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 TBC1D3EA0A087X179 549 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 TBC1D3KA0A087X1G2 549 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.17■□□□□ 0.18
USP39-205ENST00000442708 BCLAF3A2AJT9 711 aaKnown RBP16.17■□□□□ 0.18
USP39-205ENST00000442708 TBC1D3FA6NER0 549 aaPredicted RBP16.17■□□□□ 0.18
USP39-205ENST00000442708 TBC1D3LB9A6J9 549 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 EPN2O95208 641 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 FGGP02679 453 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 TBC1D3HP0C7X1 549 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 SERPINA4P29622 427 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 MAPK8P45983 427 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 GNG11P61952 73 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 SKOR1P84550 965 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 SEMG2Q02383 582 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 PTPRRQ15256 657 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 CCDC6Q16204 474 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 SPDYCQ5MJ68 293 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 KIAA0895LQ68EN5 471 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 TBC1D3GQ6DHY5 549 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 TBC1D3CQ6IPX1 549 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 DARS2Q6PI48 645 aaKnown RBP16.17■□□□□ 0.18
USP39-205ENST00000442708 PRPF39Q86UA1 669 aaKnown RBP16.17■□□□□ 0.18
USP39-205ENST00000442708 TBC1D3Q8IZP1 549 aaPredicted RBP16.17■□□□□ 0.18
USP39-205ENST00000442708 TTC13Q8NBP0 860 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 COG1Q8WTW3 980 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 C1orf54Q8WWF1 131 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 MS4A14Q96JA4 679 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 TEKT5Q96M29 485 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 ORAI3Q9BRQ5 295 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 GLOD4Q9HC38 313 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 SMARCAL1Q9NZC9 954 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 DNPEPQ9ULA0 475 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 RAB23Q9ULC3 237 aa16.17■□□□□ 0.18
USP39-205ENST00000442708 ZFR2Q9UPR6 939 aaKnown RBP16.17■□□□□ 0.18
USP39-205ENST00000442708 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.17■□□□□ 0.18
USP39-205ENST00000442708 ATXN2Q99700 1313 aaKnown RBP16.17■□□□□ 0.18
USP39-205ENST00000442708 ZNF292O60281 2723 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms