RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ANKRD36A6QL64 1941 aa11.93□□□□□ -0.5
TTC28-203ENST00000442232 ARHGAP42A6NI28 874 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 WASH4PA8MWX3 477 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 EIF3CLB5ME19 914 aaKnown RBP11.92□□□□□ -0.5
TTC28-203ENST00000442232 K7ESM1 405 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 MMP20O60882 483 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 NEBLO76041 1014 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 PSMA2P25787 234 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 YPEL5P62699 121 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 SERINC3Q13530 473 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 ACAP1Q15027 740 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 FILIP1LQ4L180 1135 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 LRRC73Q5JTD7 316 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 ERAP2Q6P179 960 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 MCOLN2Q8IZK6 566 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 FAM181AQ8N9Y4 354 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 FGF11Q92914 225 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 EIF3CQ99613 913 aaKnown RBP11.92□□□□□ -0.5
TTC28-203ENST00000442232 WRAP53Q9BUR4 548 aaKnown RBP11.92□□□□□ -0.5
TTC28-203ENST00000442232 MAGEB5Q9BZ81 275 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 PARVAQ9NVD7 372 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 DKK3Q9UBP4 350 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 MYO6Q9UM54 1294 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 AP4E1Q9UPM8 1137 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 DOLKQ9UPQ8 538 aa11.92□□□□□ -0.5
TTC28-203ENST00000442232 CPED1A4D0V7 1026 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 SMTNL1A8MU46 457 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 TMCO5BA8MYB1 307 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 EEF2KO00418 725 aaKnown RBP11.91□□□□□ -0.5
TTC28-203ENST00000442232 CSO75390 466 aaKnown RBP11.91□□□□□ -0.5
TTC28-203ENST00000442232 RNF8O76064 485 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 ANXA6P08133 673 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 HOXB3P14651 431 aaPredicted RBP11.91□□□□□ -0.5
TTC28-203ENST00000442232 IGFALSP35858 605 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 EIF2S3P41091 472 aaKnown RBP11.91□□□□□ -0.5
TTC28-203ENST00000442232 BLKP51451 505 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 NDST2P52849 883 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 PFN3P60673 137 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 RPL7AP62424 266 aaKnown RBP11.91□□□□□ -0.5
TTC28-203ENST00000442232 TYRO3Q06418 890 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 NR0B2Q15466 257 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 ASIC2Q16515 512 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 CDKN3Q16667 212 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 KLHL40Q2TBA0 621 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 DEFB133Q30KQ1 61 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 TBC1D25Q3MII6 688 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 FAXCQ5TGI0 409 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 MACC1Q6ZN28 852 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 PHACTR4Q8IZ21 702 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 LSMEM2Q8N112 164 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 UMODL1-AS1Q8N2C9 162 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 ATL2Q8NHH9 583 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 TPCN2Q8NHX9 752 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 SNIP1Q8TAD8 396 aaKnown RBP11.91□□□□□ -0.5
TTC28-203ENST00000442232 SCG3Q8WXD2 468 aaKnown RBP11.91□□□□□ -0.5
TTC28-203ENST00000442232 VCPIP1Q96JH7 1222 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 EXOC2Q96KP1 924 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 LGMNQ99538 433 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 KLF6Q99612 283 aaPredicted RBP11.91□□□□□ -0.5
TTC28-203ENST00000442232 CPEB1Q9BZB8 566 aaKnown RBP11.91□□□□□ -0.5
TTC28-203ENST00000442232 DHX35Q9H5Z1 703 aaKnown RBP11.91□□□□□ -0.5
TTC28-203ENST00000442232 SP110Q9HB58 689 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 LHX3Q9UBR4 397 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 SALL4Q9UJQ4 1053 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 MFHAS1Q9Y4C4 1052 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 IGSF10Q6WRI0 2623 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 LRRK1Q38SD2 2015 aa11.91□□□□□ -0.5
TTC28-203ENST00000442232 SHROOM3Q8TF72 1996 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 LRRC10BA6NIK2 292 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 TMEM110-MUSTN1A8MSY1 372 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 TPP1O14773 563 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 AREL1O15033 823 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 TLX3O43711 291 aaPredicted RBP11.9□□□□□ -0.5
TTC28-203ENST00000442232 USP12O75317 370 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 PIGNO95427 931 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 GIMD1P0DJR0 217 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 HTR1BP28222 390 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 SERPINA4P29622 427 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 PCBP4P57723 403 aaKnown RBP11.9□□□□□ -0.5
TTC28-203ENST00000442232 GABREP78334 506 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 PPARDQ03181 441 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 CCDC173Q0VFZ6 552 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 LRRC14Q15048 493 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 PRRT3Q5FWE3 981 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 PPP1R15BQ5SWA1 713 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 BROXQ5VW32 411 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 ESRP1Q6NXG1 681 aaKnown RBP11.9□□□□□ -0.5
TTC28-203ENST00000442232 BRAT1Q6PJG6 821 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 EFL1Q7Z2Z2 1120 aaKnown RBP11.9□□□□□ -0.5
TTC28-203ENST00000442232 HCAR2Q8TDS4 363 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 NAT6Q93015 286 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 TRIM11Q96F44 468 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 TBATAQ96M53 351 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 TUBGCP5Q96RT8 1024 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 UBL7Q96S82 380 aaPredicted RBP11.9□□□□□ -0.5
TTC28-203ENST00000442232 CINPQ9BW66 212 aaPredicted RBP11.9□□□□□ -0.5
TTC28-203ENST00000442232 KLC2Q9H0B6 622 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 NOL6Q9H6R4 1146 aaKnown RBP11.9□□□□□ -0.5
TTC28-203ENST00000442232 ATP13A3Q9H7F0 1226 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 SYNDIG1Q9H7V2 258 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms