RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 HCRTO43612 131 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 BUB1O43683 1085 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 CEP104O60308 925 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 MAGEC1O60732 1142 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 FTCDO95954 541 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 IGHV4-34P06331 123 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 GP1BAP07359 652 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 CISD3P0C7P0 127 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 YWHAQP27348 245 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 GRNP28799 593 aaKnown RBP6.6□□□□□ -1.35
HDAC6-210ENST00000441703 ATP5DP30049 168 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 DCTP40126 519 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 ACOT2P49753 483 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 TUBP50607 506 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 SLC12A3P55017 1021 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 TMED1Q13445 227 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 ENPP2Q13822 863 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 CLCA4Q14CN2 919 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 IL17AQ16552 155 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 FNDC3BQ53EP0 1204 aaKnown RBP6.6□□□□□ -1.35
HDAC6-210ENST00000441703 HYIQ5T013 277 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 DENND2CQ68D51 928 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 SLFN12LQ6IEE8 588 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 RBM44Q6ZP01 1051 aaKnown RBP6.6□□□□□ -1.35
HDAC6-210ENST00000441703 ANKS1BQ7Z6G8 1248 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 C14orf80Q86SX3 495 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 C1orf127Q8N9H9 656 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 SYT2Q8N9I0 419 aaPredicted RBP6.6□□□□□ -1.35
HDAC6-210ENST00000441703 OVCA2Q8WZ82 227 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 UTP4Q969X6 686 aaKnown RBP6.6□□□□□ -1.35
HDAC6-210ENST00000441703 RNF25Q96BH1 459 aaPredicted RBP6.6□□□□□ -1.35
HDAC6-210ENST00000441703 SERAC1Q96JX3 654 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 C8orf48Q96LL4 319 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 GBP5Q96PP8 586 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 HAPLN3Q96S86 360 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 FMO2Q99518 471 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 SLX1AQ9BQ83 275 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 ORAI3Q9BRQ5 295 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 TUBB6Q9BUF5 446 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 MMRN2Q9H8L6 949 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 FBRSQ9HAH7 460 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 NLRC4Q9NPP4 1024 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 CRTAC1Q9NQ79 661 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 CYLDQ9NQC7 956 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 ZDHHC18Q9NUE0 388 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.6□□□□□ -1.35
HDAC6-210ENST00000441703 PLK2Q9NYY3 685 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 NDUFA13Q9P0J0 144 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 KLHL14Q9P2G3 628 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 CDH9Q9ULB4 789 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 STK38LQ9Y2H1 464 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 WDR37Q9Y2I8 494 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 BZW2Q9Y6E2 419 aaKnown RBP6.6□□□□□ -1.35
HDAC6-210ENST00000441703 STYXL1Q9Y6J8 313 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 LRRK1Q38SD2 2015 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 CCDC187A0A096LP49 1063 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 A0A1B0GVG6 124 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 PVALEFA0A1B0GWK0 134 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 A0A1W2PR77 199 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 PP2D1A8MPX8 630 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 F8VP50 259 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 KRIT1O00522 736 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 MAPK13O15264 365 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 FFAR2O15552 330 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 VPS4BO75351 444 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 SHBGP04278 402 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 ITGB3P05106 788 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 ITGA2BP08514 1039 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 C7P10643 843 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 CKMT1AP12532 417 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 DESP17661 470 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 ACO1P21399 889 aaKnown RBP6.59□□□□□ -1.35
HDAC6-210ENST00000441703 COL8A1P27658 744 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 GSTT1P30711 240 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 PTDSS1P48651 473 aaKnown RBP6.59□□□□□ -1.35
HDAC6-210ENST00000441703 CACNA2D1P54289 1103 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 MFAP3P55082 362 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 PSMC1P62191 440 aaKnown RBP6.59□□□□□ -1.35
HDAC6-210ENST00000441703 IFI35P80217 286 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-210ENST00000441703 GTF2BQ00403 316 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 AMPD3Q01432 767 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 SRSF6Q13247 344 aaKnown RBP6.59□□□□□ -1.35
HDAC6-210ENST00000441703 DHX34Q14147 1143 aaKnown RBP6.59□□□□□ -1.35
HDAC6-210ENST00000441703 EIF4HQ15056 248 aaKnown RBP6.59□□□□□ -1.35
HDAC6-210ENST00000441703 GEN1Q17RS7 908 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 SOWAHAQ2M3V2 549 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 RNF220Q5VTB9 566 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 SNX30Q5VWJ9 437 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 FOXB2Q5VYV0 432 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 ZNF776Q68DI1 518 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-210ENST00000441703 CNNM4Q6P4Q7 775 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 BORAQ6PGQ7 559 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 NCEH1Q6PIU2 408 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 UNC13DQ70J99 1090 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 HTR3DQ70Z44 454 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 DPH6Q7L8W6 267 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 MAMDC2Q7Z304 686 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-210ENST00000441703 LIMS2Q7Z4I7 341 aa6.59□□□□□ -1.35
HDAC6-210ENST00000441703 MYLK4Q86YV6 388 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-210ENST00000441703 BRSK2Q8IWQ3 736 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms