RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 SGCGQ13326 291 aa17.02■□□□□ 0.32
COL16A1-204ENST00000440437 IQCB1Q15051 598 aa17.02■□□□□ 0.32
COL16A1-204ENST00000440437 ZNF542PQ5EBM4 170 aa17.02■□□□□ 0.32
COL16A1-204ENST00000440437 LRRC73Q5JTD7 316 aa17.02■□□□□ 0.32
COL16A1-204ENST00000440437 KDM7AQ6ZMT4 941 aa17.02■□□□□ 0.32
COL16A1-204ENST00000440437 CACTIN-AS1Q8N1I8 211 aa17.02■□□□□ 0.32
COL16A1-204ENST00000440437 FNIP1Q8TF40 1166 aa17.02■□□□□ 0.32
COL16A1-204ENST00000440437 CENPTQ96BT3 561 aa17.02■□□□□ 0.32
COL16A1-204ENST00000440437 NXPE2Q96DL1 559 aa17.02■□□□□ 0.32
COL16A1-204ENST00000440437 EXOC2Q96KP1 924 aa17.02■□□□□ 0.32
COL16A1-204ENST00000440437 EIF3CQ99613 913 aaKnown RBP17.02■□□□□ 0.32
COL16A1-204ENST00000440437 CPEB1Q9BZB8 566 aaKnown RBP17.02■□□□□ 0.32
COL16A1-204ENST00000440437 UBA2Q9UBT2 640 aaPredicted RBP17.02■□□□□ 0.32
COL16A1-204ENST00000440437 LY6G6EA0A0G2JKS1 128 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 TSPAN11A1L157 253 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 J3KR12 359 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 EEF2KO00418 725 aaKnown RBP17.01■□□□□ 0.31
COL16A1-204ENST00000440437 SCAMP1O15126 338 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 PRAMEF11O60813 436 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 PIGNO95427 931 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 CKMT1AP12532 417 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 DAB2P98082 770 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 PDE1CQ14123 709 aaPredicted RBP17.01■□□□□ 0.31
COL16A1-204ENST00000440437 HS1BP3Q53T59 392 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 ERMARDQ5T6L9 678 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 TTC7BQ86TV6 843 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 ZNF548Q8NEK5 533 aaPredicted RBP17.01■□□□□ 0.31
COL16A1-204ENST00000440437 CELF6Q96J87 481 aaKnown RBP17.01■□□□□ 0.31
COL16A1-204ENST00000440437 KCTD15Q96SI1 283 aaPredicted RBP17.01■□□□□ 0.31
COL16A1-204ENST00000440437 SLC39A8Q9C0K1 460 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 DHX35Q9H5Z1 703 aaKnown RBP17.01■□□□□ 0.31
COL16A1-204ENST00000440437 DONSONQ9NYP3 566 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 CNOT8Q9UFF9 292 aaKnown RBP17.01■□□□□ 0.31
COL16A1-204ENST00000440437 KLF15Q9UIH9 416 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 U3KQA8 63 aa17.01■□□□□ 0.31
COL16A1-204ENST00000440437 MMP20O60882 483 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 FTLP02792 175 aaPredicted RBP17■□□□□ 0.31
COL16A1-204ENST00000440437 ALPPL2P10696 532 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 TIMP2P16035 220 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 ITIH2P19823 946 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 KLHL30Q0D2K2 578 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 EIF2B5Q13144 721 aaKnown RBP17■□□□□ 0.31
COL16A1-204ENST00000440437 NR1I3Q14994 352 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 RTP5Q14D33 572 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 FIGNQ5HY92 759 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 AFMIDQ63HM1 303 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 C19orf48Q6RUI8 117 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 RFX8Q6ZV50 586 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 ARHGAP12Q8IWW6 846 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 DCBLD1Q8N8Z6 715 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 FAM181AQ8N9Y4 354 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 TP53I13Q8NBR0 393 aaPredicted RBP17■□□□□ 0.31
COL16A1-204ENST00000440437 CXorf40AQ8TE69 158 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 APOLD1Q96LR9 279 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 EDEM3Q9BZQ6 932 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 SCUBE2Q9NQ36 999 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 PCSK1NQ9UHG2 260 aa17■□□□□ 0.31
COL16A1-204ENST00000440437 NEMP2A6NFY4 417 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 ARHGAP42A6NI28 874 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 H3BM21 787 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 K7ESM1 405 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 LRCH4O75427 683 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 NEBLO76041 1014 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 TM7SF2O76062 418 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 RNF8O76064 485 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 ERCC2P18074 760 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 MIPP30301 263 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 PAPOLAP51003 745 aaKnown RBP16.99■□□□□ 0.31
COL16A1-204ENST00000440437 SUOXP51687 545 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 E2F1Q01094 437 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 GRM3Q14832 879 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 COL28A1Q2UY09 1125 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 TMEM52BQ4KMG9 183 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 VPS36Q86VN1 386 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 PSTKQ8IV42 348 aaKnown RBP16.99■□□□□ 0.31
COL16A1-204ENST00000440437 NPWQ8N729 165 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 HCAR2Q8TDS4 363 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 ZNF653Q96CK0 615 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 NCAPGQ9BPX3 1015 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 DUSP23Q9BVJ7 150 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 NRSN2Q9GZP1 204 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 ISCUQ9H1K1 167 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 PNMA8BQ9ULN7 279 aaPredicted RBP16.99■□□□□ 0.31
COL16A1-204ENST00000440437 CLCA2Q9UQC9 943 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 CSNK1G3Q9Y6M4 447 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 SCINQ9Y6U3 715 aa16.99■□□□□ 0.31
COL16A1-204ENST00000440437 URB1O60287 2271 aaKnown RBP16.99■□□□□ 0.31
COL16A1-204ENST00000440437 A0A087WV48 116 aa16.98■□□□□ 0.31
COL16A1-204ENST00000440437 AQP9O43315 295 aa16.98■□□□□ 0.31
COL16A1-204ENST00000440437 PRPSAP2O60256 369 aa16.98■□□□□ 0.31
COL16A1-204ENST00000440437 SKILP12757 684 aa16.98■□□□□ 0.31
COL16A1-204ENST00000440437 MYF5P13349 255 aa16.98■□□□□ 0.31
COL16A1-204ENST00000440437 JUNDP17535 347 aa16.98■□□□□ 0.31
COL16A1-204ENST00000440437 RGRP47804 291 aa16.98■□□□□ 0.31
COL16A1-204ENST00000440437 YPEL5P62699 121 aa16.98■□□□□ 0.31
COL16A1-204ENST00000440437 ELP6Q0PNE2 266 aa16.98■□□□□ 0.31
COL16A1-204ENST00000440437 KLHL40Q2TBA0 621 aa16.98■□□□□ 0.31
COL16A1-204ENST00000440437 ZSWIM9Q86XI8 627 aa16.98■□□□□ 0.31
COL16A1-204ENST00000440437 WRAP53Q9BUR4 548 aaKnown RBP16.98■□□□□ 0.31
COL16A1-204ENST00000440437 SUV39H2Q9H5I1 410 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms