RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 BTBD8Q5XKL5 378 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 SPATA31D4Q6ZUB0 917 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 OR6P1Q8NGX9 317 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 GPR152Q8TDT2 470 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 PABPC5Q96DU9 382 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 FBRSL1Q9HCM7 1045 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 SLC38A7Q9NVC3 462 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 ARHGEF38Q9NXL2 777 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 CRYL1Q9Y2S2 319 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 AP4B1Q9Y6B7 739 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 DOCK3Q8IZD9 2030 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 A0A1B0GTW7 788 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 E7ENX8 843 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 HAS3O00219 553 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 CASQ2O14958 399 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 ANXA9O76027 345 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 SLC4A1P02730 911 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 CCNCP24863 283 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 YWHAQP27348 245 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 PCSK1P29120 753 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 KCNC1P48547 511 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 CDH13P55290 713 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 WNT3AP56704 352 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 CDKL1Q00532 357 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 SULT2A1Q06520 285 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 PDAP1Q13442 181 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 FAM110CQ1W6H9 321 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 AGKQ53H12 422 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 IL23RQ5VWK5 629 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 PIM3Q86V86 326 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 PGAM4Q8N0Y7 254 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 TMEM86AQ8N2M4 240 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 RDH11Q8TC12 318 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 ZC3H15Q8WU90 426 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 FCRL5Q96RD9 977 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 NT5MQ9NPB1 228 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 PRPF19Q9UMS4 504 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 KCTD3Q9Y597 815 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 J3KR12 359 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 M0QZ92 97 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 MATN3O15232 486 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 RNASEH2AO75792 299 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 CPT1AP50416 773 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 COG7P83436 770 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 SATB1Q01826 763 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 UGP2Q16851 508 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 FBXO48Q5FWF7 155 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 RARS2Q5T160 578 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 MAP3K21Q5TCX8 1036 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 PDCD6IPQ8WUM4 868 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 ZNF385DQ9H6B1 395 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 NMUR1Q9HB89 426 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 DMAP1Q9NPF5 467 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 GIMAP2Q9UG22 337 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 PTCH2Q9Y6C5 1203 aa13.67□□□□□ -0.22
HERPUD1-204ENST00000439977 SNUPNO95149 360 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 ETFBP38117 255 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 SLC5A3P53794 718 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 FRG1Q14331 258 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 GNASQ5JWF2 1037 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 AP1ARQ63HQ0 302 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 MFN1Q8IWA4 741 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 CEP70Q8NHQ1 597 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 HMGCLL1Q8TB92 370 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 SLC45A3Q96JT2 553 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 PRPF18Q99633 342 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 IL1RL2Q9HB29 575 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 IGSF5Q9NSI5 407 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 NSMCE4AQ9NXX6 385 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 C6orf203Q9P0P8 240 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 VTI1BQ9UEU0 232 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 IPO11Q9UI26 975 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 RIMS3Q9UJD0 308 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 PTGDR2Q9Y5Y4 395 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 PLXNB2O15031 1838 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 PPP6CO00743 305 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 IRAK2O43187 625 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 CHRNA1P02708 482 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 SOX11P35716 441 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 HADHAP40939 763 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 CD86P42081 329 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 RAB27AP51159 221 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 MRPS6P82932 125 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 PURAQ00577 322 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 ADGRE1Q14246 886 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 IHHQ14623 411 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 CPSF7Q8N684 471 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 OR52K2Q8NGK3 314 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 SPPL2BQ8TCT7 592 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 PARK7Q99497 189 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 MRPL57Q9BQC6 102 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 MRPL1Q9BYD6 325 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 GRIP2Q9C0E4 1043 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 ALG9Q9H6U8 611 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 CSNK1G1Q9HCP0 422 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 LZTS1Q9Y250 596 aa13.66□□□□□ -0.22
HERPUD1-204ENST00000439977 A8MT66 165 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 PIRTP0C851 137 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 CD52P31358 61 aa13.65□□□□□ -0.22
HERPUD1-204ENST00000439977 CCR1P32246 355 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms