RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 AGO1Q9UL18 857 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 VANGL2Q9ULK5 521 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 FAM159BA6NKW6 160 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 SHISA7A6NL88 538 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 XPO1O14980 1071 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 PSMD3O43242 534 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 OPHN1O60890 802 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 TBL1XO60907 577 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 DAB1O75553 588 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 KAT7O95251 611 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 C1QAP02745 245 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 MAOBP27338 520 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 PTPN4P29074 926 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 CXCL12P48061 93 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 POLD2P49005 469 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 PRKAA2P54646 552 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 CDH6P55285 790 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 DAOAP59103 153 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 PRKD1Q15139 912 aaPredicted RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 TCEA2Q15560 299 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 CCDC14Q49A88 953 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ATP13A4Q4VNC1 1196 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 UBAP2Q5T6F2 1119 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 FSTL4Q6MZW2 842 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 LVRNQ6Q4G3 990 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 CEP68Q76N32 757 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 TAC4Q86UU9 113 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 LRRC6Q86X45 466 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 CCDC117Q8IWD4 279 aaPredicted RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 TEX9Q8N6V9 391 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 GSDMBQ8TAX9 411 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 WFDC5Q8TCV5 224 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 EZH1Q92800 747 aaPredicted RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 NT5C3BQ969T7 300 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ISL2Q96A47 359 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 NTAN1Q96AB6 310 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 PGAP3Q96FM1 320 aaPredicted RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 TRMT2BQ96GJ1 504 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ZFRQ96KR1 1074 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 OLFM3Q96PB7 478 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 RABEP2Q9H5N1 569 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 MANSC1Q9H8J5 431 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ZWILCHQ9H900 591 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 CSNK1G1Q9HCP0 422 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 SPHK2Q9NRA0 654 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ABCB8Q9NUT2 735 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 MRGBPQ9NV56 204 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ETNK2Q9NVF9 386 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 MPP6Q9NZW5 540 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 DEC1Q9P2X7 70 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 SCML2Q9UQR0 700 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 MRPS17Q9Y2R5 130 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ZFP37Q9Y6Q3 630 aaPredicted RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ANAPC1Q9H1A4 1944 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 PRRT4C9JH25 899 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 ANKRD65E5RJM6 399 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 POC1B-GALNT4F8VUJ3 575 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 ARNTLO00327 626 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 AXIN1O15169 862 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 GFRA3O60609 400 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 CCDC22O60826 627 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 H2AFYO75367 372 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 TMEM63AO94886 807 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 MAP3K6O95382 1288 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 NFATC1O95644 943 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 APOEP02649 317 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 CHRNB1P11230 501 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 TCF4P15884 667 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 KRT4P19013 534 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 CRHR1P34998 444 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 RPA3P35244 121 aaPredicted RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 VPS41P49754 854 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 CLCN2P51788 898 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 TBX4P57082 545 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 YWHAZP63104 245 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 SCAPQ12770 1279 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 GEN1Q17RS7 908 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 FNBP1LQ5T0N5 605 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 EGFLAMQ63HQ2 1017 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 TXNRD3NBQ6F5E7 133 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 TCEAL6Q6IPX3 200 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 RWDD4Q6NW29 188 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 KIAA1324Q6UXG2 1013 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 ASCL5Q7RTU5 278 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 UNC45BQ8IWX7 931 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 KLHDC8BQ8IXV7 354 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 LGI2Q8N0V4 545 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 GLIS1Q8NBF1 620 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 UHMK1Q8TAS1 419 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 DQX1Q8TE96 717 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 GANCQ8TET4 914 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 LRRN4Q8WUT4 740 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 SNX19Q92543 992 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 TCEAL3Q969E4 200 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 TMA16Q96EY4 203 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 RSRC1Q96IZ7 334 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 VAT1Q99536 393 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 EBNA1BP2Q99848 306 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 ADAM33Q9BZ11 813 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 C1orf21Q9H246 121 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms