RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 SERPINC1P01008 464 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 CSF2P04141 144 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 CYP4F3Q08477 520 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 NR1I3Q14994 352 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 CYTH1Q15438 398 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 CA9Q16790 459 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 AFMIDQ63HM1 303 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 RFX8Q6ZV50 586 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 CYP4V2Q6ZWL3 525 aaPredicted RBP16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 FAM181AQ8N9Y4 354 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 ZNF548Q8NEK5 533 aaPredicted RBP16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 CENPTQ96BT3 561 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 NXPE2Q96DL1 559 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 NCAPGQ9BPX3 1015 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 DUSP23Q9BVJ7 150 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 TRIM7Q9C029 511 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 CNOT8Q9UFF9 292 aaKnown RBP16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 ARID1BQ8NFD5 2236 aaPredicted RBP16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 ARHGAP42A6NI28 874 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 FFAR2O15552 330 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 PRPSAP2O60256 369 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 LRCH4O75427 683 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 CKMT1AP12532 417 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 MIPP30301 263 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 CLDN6P56747 220 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 ELP6Q0PNE2 266 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 PDE1CQ14123 709 aaPredicted RBP16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 NETO2Q8NC67 525 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 CXorf40AQ8TE69 158 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 ZNF653Q96CK0 615 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 CELF6Q96J87 481 aaKnown RBP16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 EXOC2Q96KP1 924 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 TUBGCP5Q96RT8 1024 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 KCTD15Q96SI1 283 aaPredicted RBP16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 C1QTNF7Q9BXJ2 289 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 ISCUQ9H1K1 167 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 USP29Q9HBJ7 922 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 MRPL47Q9HD33 250 aaKnown RBP16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 PCSK1NQ9UHG2 260 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 RALYQ9UKM9 306 aaKnown RBP16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 LHX6Q9UPM6 363 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 RAXQ9Y2V3 346 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 CSNK1G3Q9Y6M4 447 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 APC2O95996 2303 aa16.46■□□□□ 0.23
SNRPD3-204ENST00000439775 ZFYVE26Q68DK2 2539 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 A0A1W2PQJ5 194 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 J3KR12 359 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 TOR1BO14657 336 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 RIOK3O14730 519 aaKnown RBP16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 INSIG1O15503 277 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 TM7SF2O76062 418 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 PIGNO95427 931 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 TIMP2P16035 220 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 PCK1P35558 622 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 IGFALSP35858 605 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 CSNK1DP48730 415 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 HCAR3P49019 387 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 DAB2P98082 770 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 E2F1Q01094 437 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 INSM1Q01101 510 aaPredicted RBP16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 TARDBPQ13148 414 aaKnown RBP eCLIP16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 ACAP1Q15027 740 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 KLHL40Q2TBA0 621 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 TMEM52BQ4KMG9 183 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 ZNF542PQ5EBM4 170 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 LRRC73Q5JTD7 316 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 ARHGAP12Q8IWW6 846 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 DCBLD1Q8N8Z6 715 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 ZNF641Q96N77 438 aaPredicted RBP16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 SLC39A8Q9C0K1 460 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 NRSN2Q9GZP1 204 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 SCUBE2Q9NQ36 999 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 EVA1BQ9NVM1 165 aa16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 IPO11Q9UI26 975 aaKnown RBP16.45■□□□□ 0.22
SNRPD3-204ENST00000439775 K7ESM1 405 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 DAPK3O43293 454 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 MMP20O60882 483 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 GP1BAP07359 652 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 ERCC2P18074 760 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 PAPOLAP51003 745 aaKnown RBP16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 YPEL5P62699 121 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 TPM4P67936 248 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 DPYSQ14117 519 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 PTK2BQ14289 1009 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 RFTN1Q14699 578 aaPredicted RBP16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 UGP2Q16851 508 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 PPP6R3Q5H9R7 873 aaPredicted RBP16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 TPRG1LQ5T0D9 272 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 HGSNATQ68CP4 663 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 BRAT1Q6PJG6 821 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 VPS36Q86VN1 386 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 NPWQ8N729 165 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 TP53I13Q8NBR0 393 aaPredicted RBP16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 BTN2A2Q8WVV5 523 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 SYN2Q92777 582 aaPredicted RBP16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 APOLD1Q96LR9 279 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 TBATAQ96M53 351 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 SUV39H2Q9H5I1 410 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 CAAP1Q9H8G2 361 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 ZWILCHQ9H900 591 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms