RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 GSE1Q14687 1217 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 SF3A2Q15428 464 aaKnown RBP11.95□□□□□ -0.5
HSPG2-206ENST00000439717 TRIM61Q5EBN2 209 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 KAZNQ674X7 775 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 BRAT1Q6PJG6 821 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 NPNTQ6UXI9 565 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 PRPF39Q86UA1 669 aaKnown RBP11.95□□□□□ -0.5
HSPG2-206ENST00000439717 KIAA2013Q8IYS2 634 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 C1orf216Q8TAB5 229 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 SNX19Q92543 992 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 P3H4Q92791 437 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 ORAI3Q9BRQ5 295 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 NUSAP1Q9BXS6 441 aaKnown RBP11.95□□□□□ -0.5
HSPG2-206ENST00000439717 POLR1EQ9GZS1 481 aaKnown RBP11.95□□□□□ -0.5
HSPG2-206ENST00000439717 MIR1-1HGQ9H1L0 117 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 SCUBE2Q9NQ36 999 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 EIF2B4Q9UI10 523 aaKnown RBP11.95□□□□□ -0.5
HSPG2-206ENST00000439717 SLC6A14Q9UN76 642 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 DMTF1Q9Y222 760 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 CAPN6Q9Y6Q1 641 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 PIEZO1Q92508 2521 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 RNGTTO60942 597 aaKnown RBP11.94□□□□□ -0.5
HSPG2-206ENST00000439717 SOCS5O75159 536 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 NEBLO76041 1014 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 PIGNO95427 931 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 FTCDO95954 541 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 PTMAP06454 111 aaKnown RBP11.94□□□□□ -0.5
HSPG2-206ENST00000439717 AFF3P51826 1226 aaKnown RBP11.94□□□□□ -0.5
HSPG2-206ENST00000439717 POLR2LP62875 67 aaKnown RBP11.94□□□□□ -0.5
HSPG2-206ENST00000439717 RACK1P63244 317 aaKnown RBP11.94□□□□□ -0.5
HSPG2-206ENST00000439717 IFI35P80217 286 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-206ENST00000439717 AASDHQ4L235 1098 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-206ENST00000439717 SETMARQ53H47 684 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-206ENST00000439717 CFAP58Q5T655 872 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 ALG1LQ6GMV1 187 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 KIAA1161Q6NSJ0 714 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 BBS12Q6ZW61 710 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 TTC7BQ86TV6 843 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 HORMAD1Q86X24 394 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 CAMK1DQ8IU85 385 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 PGBD5Q8N414 524 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 ZCCHC9Q8N567 271 aaKnown RBP11.94□□□□□ -0.5
HSPG2-206ENST00000439717 SPOCK2Q92563 424 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 ALG3Q92685 438 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 ECHDC3Q96DC8 303 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 HES6Q96HZ4 224 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 FEM1CQ96JP0 617 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 LGMNQ99538 433 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 OSBPL8Q9BZF1 889 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 SMOC1Q9H4F8 434 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 CAPN10Q9HC96 672 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 NT5MQ9NPB1 228 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 RBM22Q9NW64 420 aaKnown RBP eCLIP11.94□□□□□ -0.54e-7■■■□□ 19
HSPG2-206ENST00000439717 PPP2R2CQ9Y2T4 447 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.94□□□□□ -0.5
HSPG2-206ENST00000439717 WDR87Q6ZQQ6 2873 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 ZNF292O60281 2723 aa11.94□□□□□ -0.5
HSPG2-206ENST00000439717 A0A1W2PQU0 124 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 LNP1A1A4G5 178 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 PATE3B3GLJ2 98 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 APOC4-APOC2K7ER74 178 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 TRAFD1O14545 582 aaPredicted RBP11.93□□□□□ -0.5
HSPG2-206ENST00000439717 AREL1O15033 823 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 DDX3YO15523 660 aaKnown RBP11.93□□□□□ -0.5
HSPG2-206ENST00000439717 TJP3O95049 919 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 PCDH8O95206 1070 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 APOC2P02655 101 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 CFIP05156 583 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 SYPP08247 313 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 PYGMP11217 842 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 TIMP2P16035 220 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 SDHBP21912 280 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 XPAP23025 273 aaPredicted RBP11.93□□□□□ -0.5
HSPG2-206ENST00000439717 ABL2P42684 1182 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 MAXP61244 160 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 PPP2CBP62714 309 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 RPS21P63220 83 aaKnown RBP11.93□□□□□ -0.5
HSPG2-206ENST00000439717 PPP2CAP67775 309 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 IRX4P78413 519 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 ADCY2Q08462 1091 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 ELP6Q0PNE2 266 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 AP1B1Q10567 949 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 TEAD4Q15561 434 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 UGP2Q16851 508 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 TCEAL6Q6IPX3 200 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 TFB1MQ8WVM0 346 aaKnown RBP11.93□□□□□ -0.5
HSPG2-206ENST00000439717 TCEAL3Q969E4 200 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 SKA1Q96BD8 255 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 ALS2CR12Q96Q35 445 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 IL12RB2Q99665 862 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 HEMGNQ9BXL5 484 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 ZDHHC5Q9C0B5 715 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 EBF2Q9HAK2 575 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 NOD2Q9HC29 1040 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 TM9SF3Q9HD45 589 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 LZTFL1Q9NQ48 299 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 PACSIN2Q9UNF0 486 aaPredicted RBP11.93□□□□□ -0.5
HSPG2-206ENST00000439717 ATP8A1Q9Y2Q0 1164 aa11.93□□□□□ -0.5
HSPG2-206ENST00000439717 UPK3BL1B0FP48 263 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 HACD1B0YJ81 288 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms