RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 SLC7A14Q8TBB6 771 aa13.69□□□□□ -0.22
PCNX3-202ENST00000439247 PPP1R14BQ96C90 147 aa13.69□□□□□ -0.22
PCNX3-202ENST00000439247 COX4I2Q96KJ9 171 aa13.69□□□□□ -0.22
PCNX3-202ENST00000439247 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
PCNX3-202ENST00000439247 FZD8Q9H461 694 aa13.69□□□□□ -0.22
PCNX3-202ENST00000439247 TRNAU1APQ9NX07 287 aaKnown RBP13.69□□□□□ -0.22
PCNX3-202ENST00000439247 SUCOQ9UBS9 1254 aaKnown RBP13.69□□□□□ -0.22
PCNX3-202ENST00000439247 ADAM28Q9UKQ2 775 aa13.69□□□□□ -0.22
PCNX3-202ENST00000439247 SQORQ9Y6N5 450 aa13.69□□□□□ -0.22
PCNX3-202ENST00000439247 FAM155AB1AL88 458 aaPredicted RBP13.68□□□□□ -0.22
PCNX3-202ENST00000439247 B4GAT1O43505 415 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 ARIH2O95376 493 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 PGK1P00558 417 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 MT-ND1P03886 318 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 KCNA5P22460 613 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 SLC7A1P30825 629 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 ESRRGP62508 458 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 RAB39AQ14964 217 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 GPRC5AQ8NFJ5 357 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 FAM149B1Q96BN6 582 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 PPP1R10Q96QC0 940 aaKnown RBP13.68□□□□□ -0.22
PCNX3-202ENST00000439247 C11orf84Q9BUA3 381 aaPredicted RBP13.68□□□□□ -0.22
PCNX3-202ENST00000439247 UNC93B1Q9H1C4 597 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 POLR1BQ9H9Y6 1135 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 TBC1D23Q9NUY8 699 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 TCRBV3S1A0A5B6 114 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 C21orf59P57076 290 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 INCA1Q0VD86 236 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 BTG3Q14201 252 aaPredicted RBP13.68□□□□□ -0.22
PCNX3-202ENST00000439247 HERC3Q15034 1050 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 PLCL1Q15111 1095 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 SPPL2CQ8IUH8 684 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 SPPL2BQ8TCT7 592 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 NAT9Q9BTE0 207 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 IL22Q9GZX6 179 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 HIPK3Q9H422 1215 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 CYP3A43Q9HB55 503 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 DPP3Q9NY33 737 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 BFARQ9NZS9 450 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 GIMAP2Q9UG22 337 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 ANKRD12Q6UB98 2062 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 SHROOM3Q8TF72 1996 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 DDHD2O94830 711 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 SLC25A27O95847 323 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 AHSGP02765 367 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 VASPP50552 380 aaPredicted RBP13.68□□□□□ -0.22
PCNX3-202ENST00000439247 BMXP51813 675 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 TUBA4AP68366 448 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 TMEM132DQ14C87 1099 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 LDLRAP1Q5SW96 308 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 EFCAB12Q6NXP0 572 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 C16orf87Q6PH81 154 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 NAT16Q8N8M0 369 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 RNF139Q8WU17 664 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 STYXQ8WUJ0 223 aa13.68□□□□□ -0.22
PCNX3-202ENST00000439247 MLPHQ9BV36 600 aaPredicted RBP13.68□□□□□ -0.22
PCNX3-202ENST00000439247 IPO11Q9UI26 975 aaKnown RBP13.68□□□□□ -0.22
PCNX3-202ENST00000439247 TARM1B6A8C7 271 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 IL18RAPO95256 599 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 KCNH1O95259 989 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 PTPN3P26045 913 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 HALP42357 657 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 PHEXP78562 749 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 MXD4Q14582 209 aaPredicted RBP13.67□□□□□ -0.22
PCNX3-202ENST00000439247 ZC3HC1Q86WB0 502 aaKnown RBP13.67□□□□□ -0.22
PCNX3-202ENST00000439247 ZC3H7AQ8IWR0 971 aaKnown RBP13.67□□□□□ -0.22
PCNX3-202ENST00000439247 HM13Q8TCT9 377 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 POMKQ9H5K3 350 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 EIF2B3Q9NR50 452 aaKnown RBP13.67□□□□□ -0.22
PCNX3-202ENST00000439247 TANC1Q9C0D5 1861 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 A0A087WXM4 84 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 MRASO14807 208 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 CABYRO75952 493 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 HMOX2P30519 316 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 OXTRP30559 389 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 CD68P34810 354 aaPredicted RBP13.67□□□□□ -0.22
PCNX3-202ENST00000439247 POLR2IP36954 125 aaKnown RBP13.67□□□□□ -0.22
PCNX3-202ENST00000439247 SULT1E1P49888 294 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 KPNA1P52294 538 aaPredicted RBP13.67□□□□□ -0.22
PCNX3-202ENST00000439247 TRAF2Q12933 501 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 KCTD2Q14681 263 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 CYP2A13Q16696 494 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 ANO4Q32M45 955 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 CLEC6AQ6EIG7 209 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 PPP4R4Q6NUP7 873 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 FAM35AQ86V20 835 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 DHFR2Q86XF0 187 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 DEFB106AQ8N104 65 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 PELI3Q8N2H9 469 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 OR6B3Q8NGW1 331 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 CENPIQ92674 756 aaPredicted RBP13.67□□□□□ -0.22
PCNX3-202ENST00000439247 NEURL2Q9BR09 285 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 ADI1Q9BV57 179 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 SPAG4Q9NPE6 437 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 CD300AQ9UGN4 299 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 FZD10Q9ULW2 581 aa13.67□□□□□ -0.22
PCNX3-202ENST00000439247 MCM3APO60318 1980 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 DNAJC25-GNG10A0A024R161 153 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 SLC10A3P09131 477 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 NCAM1P13591 858 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms