RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TNFRSF1BP20333 461 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 CHMP24386 653 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 EPHA8P29322 1005 aaPredicted RBP3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 CDC25AP30304 524 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 HOXD3P31249 432 aaPredicted RBP3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 MAN1A1P33908 653 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 PPP3CCP48454 512 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 CCR9P51686 369 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 PGGT1BP53609 377 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 P2RX3P56373 397 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 ROR2Q01974 943 aaKnown RBP3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 FAM27E3Q08E93 113 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 ITGADQ13349 1161 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 LEXMQ3ZCV2 418 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 DNTTIP2Q5QJE6 756 aaKnown RBP3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 DAB2IPQ5VWQ8 1189 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 NUGGCQ68CJ6 796 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 LURAP1LQ8IV03 231 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 DIS3L2Q8IYB7 885 aaKnown RBP3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 KIAA2013Q8IYS2 634 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 TDRD7Q8NHU6 1098 aaKnown RBP3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 ETNPPLQ8TBG4 499 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 NSMCE1Q8WV22 266 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 ZC3HAV1LQ96H79 300 aaKnown RBP3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 NR1H4Q96RI1 486 aaPredicted RBP3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 SIN3AQ96ST3 1273 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 YME1L1Q96TA2 773 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 SF3B5Q9BWJ5 86 aaKnown RBP3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 LHPPQ9H008 270 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 FAM234AQ9H0X4 552 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 RBM38Q9H0Z9 239 aaKnown RBP3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 TTYH1Q9H313 450 aaPredicted RBP3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 BRF2Q9HAW0 419 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 SMYD2Q9NRG4 433 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 C20orf141Q9NUB4 165 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 HSPB7Q9UBY9 170 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 A4GNTQ9UNA3 340 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 NAALADL1Q9UQQ1 740 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 FAM96BQ9Y3D0 163 aa3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 TDRD9Q8NDG6 1382 aaKnown RBP3.96□□□□□ -1.78
LSM1P1-201ENST00000438629 A0A087X0M5 115 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 A0A1B0GX30 115 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 A0A1W2PQM1 296 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 OR6C75A6NL08 312 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 KLRF2D3W0D1 207 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 USP17L23D6RBM5 183 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 TNFSF14O43557 240 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 OAZ2O95190 189 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 CCNDBP1O95273 360 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 CLDN7O95471 211 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 CD4P01730 458 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 SRD5A1P18405 259 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 CD58P19256 250 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 TNFAIP3P21580 790 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 GNLYP22749 145 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 RFX2P48378 723 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 GNAQP50148 359 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 HDAC4P56524 1084 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 RPL7AP62424 266 aaKnown RBP3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 IRX6P78412 446 aaPredicted RBP3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 ADORA2A-AS1P86434 159 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 PPATQ06203 517 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 DSC1Q08554 894 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 TRAF2Q12933 501 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 PPP2R5BQ15173 497 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 MAPRE1Q15691 268 aaKnown RBP3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 CCNG2Q16589 344 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 FSCBQ5H9T9 825 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 TXNDC8Q6A555 127 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 CES5AQ6NT32 575 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 Q6ZTK2 550 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 NEK10Q6ZWH5 1172 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 TRILQ7L0X0 811 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 SLC46A3Q7Z3Q1 461 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 TECPR1Q7Z6L1 1165 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 CCDC105Q8IYK2 499 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 METTL6Q8TCB7 284 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 NEK9Q8TD19 979 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 ADAMTS15Q8TE58 950 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 UCMAQ8WVF2 138 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 ZNF48Q96MX3 618 aaPredicted RBP3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 MMTAG2Q9BU76 263 aaKnown RBP3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 POLDIP3Q9BY77 421 aaKnown RBP3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 SLC25A18Q9H1K4 315 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 PLAC1Q9HBJ0 212 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 SMC4Q9NTJ3 1288 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 PLK2Q9NYY3 685 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 PAM16Q9Y3D7 125 aa3.95□□□□□ -1.78
LSM1P1-201ENST00000438629 FAM90A10PA6NDY2 464 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 CD8B2A6NJW9 211 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 EIF3CLB5ME19 914 aaKnown RBP3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 SPRY3O43610 288 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 ITM2AO43736 263 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 ATP2C2O75185 946 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 BAIAP3O94812 1187 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 TBX18O95935 607 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 TFP02787 698 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 CENPBP07199 599 aaPredicted RBP3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 NAGAP17050 411 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 DCTDP32321 178 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms