RNA–Protein interactions for RNA: ENST00000436894.1

NCL-204, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-204ENST00000436894 TRPV5Q9NQA5 729 aa4.84□□□□□ -1.63
NCL-204ENST00000436894 SERHLQ9NQF3 203 aa4.84□□□□□ -1.63
NCL-204ENST00000436894 GDE1Q9NZC3 331 aa4.84□□□□□ -1.63
NCL-204ENST00000436894 DNMT3BQ9UBC3 853 aaKnown RBP4.84□□□□□ -1.63
NCL-204ENST00000436894 DNAJB4Q9UDY4 337 aa4.84□□□□□ -1.63
NCL-204ENST00000436894 PIN4Q9Y237 131 aaKnown RBP4.84□□□□□ -1.63
NCL-204ENST00000436894 CEP83Q9Y592 693 aa4.84□□□□□ -1.63
NCL-204ENST00000436894 PCDHB2Q9Y5E7 798 aa4.84□□□□□ -1.63
NCL-204ENST00000436894 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.84□□□□□ -1.63
NCL-204ENST00000436894 LAMA5O15230 3695 aa4.84□□□□□ -1.63
NCL-204ENST00000436894 IGSF10Q6WRI0 2623 aa4.84□□□□□ -1.63
NCL-204ENST00000436894 KALRNO60229 2985 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 MAST4O15021 2626 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 HELZ2Q9BYK8 2649 aaKnown RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 IGF2RP11717 2491 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 LOC102723971A0A1B0GUV8 181 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 A0A1W2PS29 197 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 SMCO2A6NFE2 343 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 CLCA1A8K7I4 914 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 F5H697 171 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 DDX39AO00148 427 aaKnown RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 RNASET2O00584 256 aaKnown RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 ASAP2O43150 1006 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 DKC1O60832 514 aaKnown RBP eCLIP4.83□□□□□ -1.64
NCL-204ENST00000436894 DDHD2O94830 711 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 SPDEFO95238 335 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 PAPSS2O95340 614 aaPredicted RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 PDHA1P08559 390 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 ATXN1LP0C7T5 689 aaKnown RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 TDGF1P13385 188 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 CPA1P15085 419 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 ITGALP20701 1170 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 AXLP30530 894 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 OR1G1P47890 313 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 NPTX2P47972 431 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 CXCL12P48061 93 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 JAK3P52333 1124 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 MTAPQ13126 283 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 TP53BP2Q13625 1128 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 SLC29A2Q14542 456 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 STARD3Q14849 445 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 ELF2Q15723 593 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 NRN1LQ496H8 165 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 XKR3Q5GH77 459 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 PPM1LQ5SGD2 360 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 RBM20Q5T481 1227 aaKnown RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 N4BP2L1Q5TBK1 243 aaPredicted RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 ARHGAP40Q5TG30 622 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 CACHD1Q5VU97 1274 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 PLAG1Q6DJT9 500 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 LAYNQ6UX15 382 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 TPRG1Q6ZUI0 275 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 GRASPQ7Z6J2 395 aaPredicted RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 LONP2Q86WA8 852 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 PALB2Q86YC2 1186 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 MYLK4Q86YV6 388 aaPredicted RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 YAF2Q8IY57 180 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 LRRC71Q8N4P6 559 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 ZNF276Q8N554 614 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 TTC9BQ8N6N2 239 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 FANCBQ8NB91 859 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 BPIFB1Q8TDL5 484 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 IPO4Q8TEX9 1081 aaKnown RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 CCDC12Q8WUD4 166 aaPredicted RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 TMEM171Q8WVE6 324 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 FGF13Q92913 245 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 ELSPBP1Q96BH3 223 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 CCDC51Q96ER9 411 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 PPP1R9BQ96SB3 815 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 RIT2Q99578 217 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 UNKLQ9H9P5 680 aaKnown RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 PDRG1Q9NUG6 133 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 AGPAT5Q9NUQ2 364 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 RBM28Q9NW13 759 aaKnown RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 SUCLA2Q9P2R7 463 aaPredicted RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 NAP1L2Q9ULW6 460 aaPredicted RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 MAGED2Q9UNF1 606 aaPredicted RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 MTF2Q9Y483 593 aaPredicted RBP4.83□□□□□ -1.64
NCL-204ENST00000436894 CDY1Q9Y6F8 540 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 FREM2Q5SZK8 3169 aa4.83□□□□□ -1.64
NCL-204ENST00000436894 ZMYM2Q9UBW7 1377 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 MYH15Q9Y2K3 1946 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 IGLV3-22A0A075B6J6 115 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 IGKV6-21A0A0C4DH24 114 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 AQP12BA6NM10 295 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 FAM86B1E9PN63 330 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 ADAMTS3O15072 1205 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 RRP9O43818 475 aaKnown RBP4.82□□□□□ -1.64
NCL-204ENST00000436894 TADA2AO75478 443 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 RASAL1O95294 804 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 PLEKHA8P1O95397 391 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 FAM86B2P0C5J1 330 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 ZNF806P0C7X5 589 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 RPS6KB1P23443 525 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 DDX6P26196 483 aaKnown RBP eCLIP4.82□□□□□ -1.64
NCL-204ENST00000436894 GABRB3P28472 473 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 GNA11P29992 359 aa4.82□□□□□ -1.64
NCL-204ENST00000436894 PDIA3P30101 505 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms