RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 SHCBP1LQ9BZQ2 653 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 WDR55Q9H6Y2 383 aaPredicted RBP10.52□□□□□ -0.73
CD44-210ENST00000434472 EFCAB1Q9HAE3 211 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 RRAGCQ9HB90 399 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 TRPC7Q9HCX4 862 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 PRDM5Q9NQX1 630 aaPredicted RBP10.52□□□□□ -0.73
CD44-210ENST00000434472 COMMD8Q9NX08 183 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 HACD3Q9P035 362 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 SLC2A6Q9UGQ3 507 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 ZDHHC2Q9UIJ5 367 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 NOD1Q9Y239 953 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 PCDHB5Q9Y5E4 795 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 SHROOM3Q8TF72 1996 aa10.52□□□□□ -0.73
CD44-210ENST00000434472 NEMP1O14524 444 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 AIM2O14862 343 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 CASQ2O14958 399 aaPredicted RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 PENKP01210 267 aaPredicted RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 ASGR1P07306 291 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 PAX7P23759 505 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 NUDT2P50583 147 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 GALNT1Q10472 559 aaPredicted RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 DLG1Q12959 904 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 CDC16Q13042 620 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 ITGA7Q13683 1181 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 ACAP2Q15057 778 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 TRIP4Q15650 581 aaPredicted RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 TRIM71Q2Q1W2 868 aaKnown RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 TECRLQ5HYJ1 363 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 PIK3R6Q5UE93 754 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 ZFP1Q6P2D0 407 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 PDSS2Q86YH6 399 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 HPS6Q86YV9 775 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 TMEM126BQ8IUX1 230 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 PGAM4Q8N0Y7 254 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 TEX26Q8N6G2 289 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 KDM1BQ8NB78 822 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 PCSK9Q8NBP7 692 aaKnown RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 CATSPER1Q8NEC5 780 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 PIP4K2CQ8TBX8 421 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 AGR3Q8TD06 166 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 HEXDCQ8WVB3 486 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 TRIB2Q92519 343 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 MAELQ96JY0 434 aaKnown RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 OMDQ99983 421 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 LBHD1Q9BQE6 289 aaPredicted RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 FTHL17Q9BXU8 183 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 NUF2Q9BZD4 464 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 POMKQ9H5K3 350 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 SP110Q9HB58 689 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 NT5MQ9NPB1 228 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 RGS18Q9NS28 235 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 MPP6Q9NZW5 540 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 C6orf203Q9P0P8 240 aaPredicted RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 DLGAP2Q9P1A6 1054 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 PTPRDP23468 1912 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 TDRD15B5MCY1 1934 aaKnown RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 IGLV3-10A0A075B6K4 115 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 SYN3O14994 580 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 RTN3O95197 1032 aaPredicted RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 PEX11BO96011 259 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 SLC10A3P09131 477 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 EPHA3P29320 983 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 CHRNA4P43681 627 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 IL10RBQ08334 325 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 ITKQ08881 620 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 ART3Q13508 389 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 KCNA10Q16322 511 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 PCSK7Q16549 785 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 NOMO2Q5JPE7 1267 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 FAM45BPQ6NSW5 357 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 TRIM67Q6ZTA4 783 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 SDCCAG8Q86SQ7 713 aaPredicted RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 KBTBD6Q86V97 674 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 MFSD6LQ8IWD5 586 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 ZNF683Q8IZ20 524 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 DSELQ8IZU8 1212 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 KLHDC9Q8NEP7 349 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 FAM45AQ8TCE6 357 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 GDPD5Q8WTR4 605 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 UCMAQ8WVF2 138 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 PYDC1Q8WXC3 89 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 DLG3Q92796 817 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 PEX13Q92968 403 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 BTN2A3PQ96KV6 586 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 CATSPER2Q96P56 530 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 TRAPPC9Q96Q05 1148 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 TRMOQ9BU70 441 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 FAM192AQ9GZU8 254 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.51□□□□□ -0.73
CD44-210ENST00000434472 MFSD1Q9H3U5 465 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 NOL6Q9H6R4 1146 aaKnown RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 ZBTB26Q9HCK0 441 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 IGSF5Q9NSI5 407 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 NDFIP2Q9NV92 336 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 ABI2Q9NYB9 513 aaPredicted RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 UTP6Q9NYH9 597 aaKnown RBP10.51□□□□□ -0.73
CD44-210ENST00000434472 IL37Q9NZH6 218 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 PSMD13Q9UNM6 376 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 NLRC5Q86WI3 1866 aa10.51□□□□□ -0.73
CD44-210ENST00000434472 OR6C75A6NL08 312 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms