RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 PGAP3Q96FM1 320 aaPredicted RBP14.91□□□□□ -0.02
DDX56-205ENST00000433257 TSPAN17Q96FV3 270 aa14.91□□□□□ -0.02
DDX56-205ENST00000433257 CPB2Q96IY4 423 aa14.91□□□□□ -0.02
DDX56-205ENST00000433257 DEFB118Q96PH6 123 aa14.91□□□□□ -0.02
DDX56-205ENST00000433257 TSGA13Q96PP4 275 aa14.91□□□□□ -0.02
DDX56-205ENST00000433257 HNRNPABQ99729 332 aaKnown RBP14.91□□□□□ -0.02
DDX56-205ENST00000433257 DUSP16Q9BY84 665 aa14.91□□□□□ -0.02
DDX56-205ENST00000433257 PRKD2Q9BZL6 878 aa14.91□□□□□ -0.02
DDX56-205ENST00000433257 MEAF6Q9HAF1 191 aa14.91□□□□□ -0.02
DDX56-205ENST00000433257 PAK6Q9NQU5 681 aaPredicted RBP14.91□□□□□ -0.02
DDX56-205ENST00000433257 TRIP11Q15643 1979 aa14.91□□□□□ -0.02
DDX56-205ENST00000433257 AQP12BA6NM10 295 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 CBFA2T3O75081 653 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 GPC4O75487 556 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 RNASEH2AO75792 299 aaKnown RBP14.9□□□□□ -0.02
DDX56-205ENST00000433257 SNRPB2P08579 225 aaKnown RBP14.9□□□□□ -0.02
DDX56-205ENST00000433257 TXNP10599 105 aaKnown RBP14.9□□□□□ -0.02
DDX56-205ENST00000433257 AXLP30530 894 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 SLC5A2P31639 672 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 CYP2C18P33260 490 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 HTR7P34969 479 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 ADRA1BP35368 520 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 STX1BP61266 288 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 CDKL1Q00532 357 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 BNIP2Q12982 314 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 INPP5AQ14642 412 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 DCAF6Q58WW2 860 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 ACBD5Q5T8D3 534 aaPredicted RBP14.9□□□□□ -0.02
DDX56-205ENST00000433257 C9orf57Q5W0N0 161 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 SLC27A1Q6PCB7 646 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 GPR141Q7Z602 305 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 CAMK1DQ8IU85 385 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 AQP12AQ8IXF9 295 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 SIX6OS1Q8N1H7 587 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 TMEM151AQ8N4L1 468 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 APPL2Q8NEU8 664 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 PPHLN1Q8NEY8 458 aaKnown RBP14.9□□□□□ -0.02
DDX56-205ENST00000433257 CALML6Q8TD86 181 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 LRRN4Q8WUT4 740 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 TRAPPC12Q8WVT3 735 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.9□□□□□ -0.02
DDX56-205ENST00000433257 KLHL32Q96NJ5 620 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 TCF12Q99081 682 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 AGAP2Q99490 1192 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 TMEM79Q9BSE2 394 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 OCEL1Q9H607 264 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 CD320Q9NPF0 282 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 CROTQ9UKG9 612 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 PCDHGA7Q9Y5G6 932 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.9□□□□□ -0.02
DDX56-205ENST00000433257 M0QYT0 321 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 TK2O00142 265 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 PSMD12O00232 456 aaPredicted RBP14.9□□□□□ -0.02
DDX56-205ENST00000433257 SDHDO14521 159 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 UBDO15205 165 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 SLC35E2BP0CK96 405 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 ERCC2P18074 760 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 WARSP23381 471 aaKnown RBP14.9□□□□□ -0.02
DDX56-205ENST00000433257 SLC26A3P40879 764 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 ATXN1P54253 815 aaKnown RBP14.9□□□□□ -0.02
DDX56-205ENST00000433257 LRP8Q14114 963 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 ZBED5Q49AG3 693 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 AGAP9Q5VTM2 703 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 TAPT1Q6NXT6 567 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 CES3Q6UWW8 571 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 PYROXD2Q8N2H3 581 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 BBS5Q8N3I7 341 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 TOP6BLQ8N6T0 577 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 FNDC8Q8TC99 324 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 CLEC4CQ8WTT0 213 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 USP13Q92995 863 aaPredicted RBP14.9□□□□□ -0.02
DDX56-205ENST00000433257 CNDP2Q96KP4 475 aaKnown RBP14.9□□□□□ -0.02
DDX56-205ENST00000433257 TEKT5Q96M29 485 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 HOPXQ9BPY8 73 aaPredicted RBP14.9□□□□□ -0.02
DDX56-205ENST00000433257 TRIM62Q9BVG3 475 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 KATNBL1Q9H079 304 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 CAB39LQ9H9S4 337 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 PDGFCQ9NRA1 345 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 DDX18Q9NVP1 670 aaKnown RBP14.9□□□□□ -0.02
DDX56-205ENST00000433257 LMCD1Q9NZU5 365 aa14.9□□□□□ -0.02
DDX56-205ENST00000433257 KANSL1LA0AUZ9 987 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 CACNG3O60359 315 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 DLX3O60479 287 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 SPATA31D3P0C874 917 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 ADCYAP1R1P41586 468 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 MAGEA8P43361 318 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 TAF6P49848 677 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 NME5P56597 212 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 SEMA3BQ13214 749 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 FASTKQ14296 549 aaKnown RBP14.89□□□□□ -0.03
DDX56-205ENST00000433257 FAM83EQ2M2I3 478 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 IL23RQ5VWK5 629 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 REP15Q6BDI9 236 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 PKN3Q6P5Z2 889 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 SPATA31D4Q6ZUB0 917 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 LIMS2Q7Z4I7 341 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 GALNT7Q86SF2 657 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 AMIGO2Q86SJ2 522 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 DHFR2Q86XF0 187 aa14.89□□□□□ -0.03
DDX56-205ENST00000433257 ZNF354CQ86Y25 554 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms