RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 PCYOX1LQ8NBM8 494 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 TTC16Q8NEE8 873 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 PPP4R1Q8TF05 950 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 CLEC4DQ8WXI8 215 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 KCTD13Q8WZ19 329 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 ATP2A3Q93084 1043 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 SLC35B4Q969S0 331 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 FAF2Q96CS3 445 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 MCRS1Q96EZ8 462 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 DNAJC1Q96KC8 554 aaKnown RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 MRGPRX2Q96LB1 330 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 RANBP9Q96S59 729 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 DOK1Q99704 481 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 KIFC3Q9BVG8 833 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 OSBPL11Q9BXB4 747 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 MRPL1Q9BYD6 325 aaKnown RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 GRIP2Q9C0E4 1043 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 SMYD3Q9H7B4 428 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 PALMDQ9NP74 551 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 TMPRSS4Q9NRS4 437 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 COPG2Q9UBF2 871 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 SUCOQ9UBS9 1254 aaKnown RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 MARCOQ9UEW3 520 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 AGO2Q9UKV8 859 aaKnown RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 PAIP2BQ9ULR5 123 aaKnown RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 CDY2AQ9Y6F7 541 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 CDY1Q9Y6F8 540 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 TTC28Q96AY4 2481 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 PHIPQ8WWQ0 1821 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 A0A0G2JLL6 359 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 RGSL1A5PLK6 1076 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 C2orf81A6NN90 581 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 H2AFYO75367 372 aaKnown RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 MAFO75444 373 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 GCATO75600 419 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 PDE5AO76074 875 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 H6PDO95479 791 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 PF4P02776 101 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 ALDOAP04075 364 aaKnown RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 KITP10721 976 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 PHKA2P46019 1235 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 ABCE1P61221 599 aaKnown RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 TNFAIP2Q03169 654 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 PDK2Q15119 407 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 SLC14A2Q15849 920 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 KCTD21Q4G0X4 260 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 PDCD4Q53EL6 469 aaKnown RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 ATG14Q6ZNE5 492 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 GADL1Q6ZQY3 521 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 PRRT2Q7Z6L0 340 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 CTAGE3PQ8IX95 158 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 LILRA2Q8N149 483 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 IL31RAQ8NI17 732 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 USP7Q93009 1102 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 RBM18Q96H35 190 aaKnown RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 PRPF18Q99633 342 aaKnown RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 APOL6Q9BWW8 343 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 MRPL4Q9BYD3 311 aaKnown RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 OSBPL6Q9BZF3 934 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 FAM124BQ9H5Z6 455 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 DDX18Q9NVP1 670 aaKnown RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 RHBDL2Q9NX52 303 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 RBAKQ9NYW8 714 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 ZMAT5Q9UDW3 170 aaKnown RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 MTF2Q9Y483 593 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-202ENST00000432306 PCDHA10Q9Y5I2 948 aa8.15□□□□□ -1.1
VTI1A-202ENST00000432306 SIP14410 1827 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 SOBPA7XYQ1 873 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 H3BNH8 94 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 K7ESF4 209 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 DDX39AO00148 427 aaKnown RBP8.15□□□□□ -1.11
VTI1A-202ENST00000432306 TXNDC9O14530 226 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 ACOT8O14734 319 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 TPP1O14773 563 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 ZBTB14O43829 449 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 CLASP2O75122 1294 aaKnown RBP8.15□□□□□ -1.11
VTI1A-202ENST00000432306 SORBS2O94875 1100 aaKnown RBP8.15□□□□□ -1.11
VTI1A-202ENST00000432306 ZFXP17010 805 aaPredicted RBP8.15□□□□□ -1.11
VTI1A-202ENST00000432306 ZNF12P17014 697 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 PSMC3P17980 439 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 MIPP30301 263 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 ARRB2P32121 409 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 TTKP33981 857 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 LIG4P49917 911 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 PSMD7P51665 324 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 PRKAA2P54646 552 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 SEMA5AQ13591 1074 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 SCARB2Q14108 478 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 PCBP1Q15365 356 aaKnown RBP eCLIP8.15□□□□□ -1.11
VTI1A-202ENST00000432306 SETMARQ53H47 684 aaPredicted RBP8.15□□□□□ -1.11
VTI1A-202ENST00000432306 N4BP2L1Q5TBK1 243 aaPredicted RBP8.15□□□□□ -1.11
VTI1A-202ENST00000432306 ZNF697Q5TEC3 545 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 CNSTQ6PJW8 725 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 MAMDC4Q6UXC1 1216 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 CCDC149Q6ZUS6 474 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 PDZD4Q76G19 769 aaPredicted RBP8.15□□□□□ -1.11
VTI1A-202ENST00000432306 KDELC2Q7Z4H8 507 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 XYLT1Q86Y38 959 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 RFX6Q8HWS3 928 aa8.15□□□□□ -1.11
VTI1A-202ENST00000432306 ETFBKMTQ8IXQ9 262 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms