RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 AKAP13Q12802 2813 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 ENC1O14682 589 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 PIGNO95427 931 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 CYP1A2P05177 515 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 IL1R2P27930 398 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 EIF4A3P38919 411 aaKnown RBP17.79■□□□□ 0.44
NUP50-208ENST00000430547 SUOXP51687 545 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 ELP6Q0PNE2 266 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 DPYSQ14117 519 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 KRT81Q14533 505 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 HADHQ16836 314 aaKnown RBP17.79■□□□□ 0.44
NUP50-208ENST00000430547 KYAT3Q6YP21 454 aaKnown RBP17.79■□□□□ 0.44
NUP50-208ENST00000430547 Q6ZSR6 202 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 ARHGAP12Q8IWW6 846 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 NPWQ8N729 165 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 ZNF564Q8TBZ8 553 aaPredicted RBP17.79■□□□□ 0.44
NUP50-208ENST00000430547 CTNNBL1Q8WYA6 563 aaPredicted RBP17.79■□□□□ 0.44
NUP50-208ENST00000430547 GATA6Q92908 595 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 BTBD6Q96KE9 485 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 C1QTNF2Q9BXJ5 285 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 KLHL11Q9NVR0 708 aa17.79■□□□□ 0.44
NUP50-208ENST00000430547 IPO11Q9UI26 975 aaKnown RBP17.79■□□□□ 0.44
NUP50-208ENST00000430547 PLXNB3Q9ULL4 1909 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 FAM221BA6H8Z2 402 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 INSIG1O15503 277 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 RARAP10276 462 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 TCF4P15884 667 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 SERPINA4P29622 427 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 HNRNPH3P31942 346 aaKnown RBP17.78■□□□□ 0.44
NUP50-208ENST00000430547 SERPINB6P35237 376 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 RABIFP47224 123 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 IL10RBQ08334 325 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 FGL2Q14314 439 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 RFTN1Q14699 578 aaPredicted RBP17.78■□□□□ 0.44
NUP50-208ENST00000430547 AFMIDQ63HM1 303 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 POLNQ7Z5Q5 900 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 GALNT15Q8N3T1 639 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 RNF214Q8ND24 703 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 DENND6BQ8NEG7 585 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 OR8K1Q8NGG5 319 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 TEKT4Q8WW24 435 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 ZNF641Q96N77 438 aaPredicted RBP17.78■□□□□ 0.44
NUP50-208ENST00000430547 LENG8Q96PV6 779 aaPredicted RBP17.78■□□□□ 0.44
NUP50-208ENST00000430547 TUBGCP5Q96RT8 1024 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 SUV39H2Q9H5I1 410 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 ATP13A3Q9H7F0 1226 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 CTTNBP2NLQ9P2B4 639 aa17.78■□□□□ 0.44
NUP50-208ENST00000430547 POM121BA6NF01 834 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 AREL1O15033 823 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 MMP20O60882 483 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 TM7SF2O76062 418 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 AMPD1P23109 780 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 RENBPP51606 427 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 SLC18A3Q16572 532 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 ERAP2Q6P179 960 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 BRAT1Q6PJG6 821 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 SRLQ86TD4 932 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 TSEN2Q8NCE0 465 aaKnown RBP17.77■□□□□ 0.44
NUP50-208ENST00000430547 HCAR2Q8TDS4 363 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 ASB12Q8WXK4 309 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 ZCCHC14Q8WYQ9 949 aaKnown RBP17.77■□□□□ 0.44
NUP50-208ENST00000430547 IFT43Q96FT9 208 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 CSPG4P5Q96PW8 444 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 WRAP53Q9BUR4 548 aaKnown RBP17.77■□□□□ 0.44
NUP50-208ENST00000430547 TMEM121BQ9BXQ6 578 aaPredicted RBP17.77■□□□□ 0.44
NUP50-208ENST00000430547 DNAJC28Q9NX36 388 aa17.77■□□□□ 0.44
NUP50-208ENST00000430547 ARID1BQ8NFD5 2236 aaPredicted RBP17.77■□□□□ 0.44
NUP50-208ENST00000430547 USP24Q9UPU5 2620 aa17.77■□□□□ 0.43
NUP50-208ENST00000430547 KMT2BQ9UMN6 2715 aaPredicted RBP17.76■□□□□ 0.43
NUP50-208ENST00000430547 SPEGQ15772 3267 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 H3BM21 787 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 RAD51BO15315 384 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 SPINT1O43278 529 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 AKR1B10O60218 316 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 RFPL3O75679 317 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 DKK1O94907 266 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 H2AFZP0C0S5 128 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 CDK4P11802 303 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 TIMP2P16035 220 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 GJC1P36383 396 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 CSNK1DP48730 415 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 THOP1P52888 689 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 CDH6P55285 790 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 SLC25A11Q02978 314 aaKnown RBP17.76■□□□□ 0.43
NUP50-208ENST00000430547 PDE1CQ14123 709 aaPredicted RBP17.76■□□□□ 0.43
NUP50-208ENST00000430547 ZNF235Q14590 738 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 LBRQ14739 615 aaKnown RBP17.76■□□□□ 0.43
NUP50-208ENST00000430547 TMCO4Q5TGY1 634 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 ARHGAP36Q6ZRI8 547 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 H2AFVQ71UI9 128 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 PARGQ86W56 976 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 SLC22A18ASQ8N1D0 253 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 BBS5Q8N3I7 341 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 ATPAF2Q8N5M1 289 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 NSMCE1Q8WV22 266 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 VOPP1Q96AW1 172 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 BMFQ96LC9 184 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 ZNF599Q96NL3 588 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 DNAJC7Q99615 494 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 PCDH18Q9HCL0 1135 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms