RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 CPEB1Q9BZB8 566 aaKnown RBP17.25■□□□□ 0.35
LINC00887-203ENST00000429578 ZDHHC4Q9NPG8 344 aa17.25■□□□□ 0.35
LINC00887-203ENST00000429578 CACNA2D2Q9NY47 1150 aa17.25■□□□□ 0.35
LINC00887-203ENST00000429578 RAB21Q9UL25 225 aa17.25■□□□□ 0.35
LINC00887-203ENST00000429578 STON1Q9Y6Q2 735 aa17.25■□□□□ 0.35
LINC00887-203ENST00000429578 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.24■□□□□ 0.35
LINC00887-203ENST00000429578 KRBA1A5PL33 1030 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 WASH3PC4AMC7 463 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 PDGFBP01127 241 aaPredicted RBP17.24■□□□□ 0.35
LINC00887-203ENST00000429578 HLA-EP13747 358 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 PRKCHP24723 683 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 WNT3AP56704 352 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 STARD6P59095 220 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 VSNL1P62760 191 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 MRPS21P82921 87 aaKnown RBP17.24■□□□□ 0.35
LINC00887-203ENST00000429578 RAD51Q06609 339 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 GRM3Q14832 879 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 C2orf27AQ580R0 203 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 NAPEPLDQ6IQ20 393 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 MCUQ8NE86 351 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 IPMKQ8NFU5 416 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 TUBGCP5Q96RT8 1024 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 FSD1LQ9BXM9 530 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 NEUROG2Q9H2A3 272 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 MTG2Q9H4K7 406 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 SUN2Q9UH99 717 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 NFU1Q9UMS0 254 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 HOXD11P31277 338 aaPredicted RBP17.24■□□□□ 0.35
LINC00887-203ENST00000429578 ADRA1AP35348 466 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 SARNPP82979 210 aaKnown RBP17.24■□□□□ 0.35
LINC00887-203ENST00000429578 PCSK7Q16549 785 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 CCNI2Q6ZMN8 369 aaPredicted RBP17.24■□□□□ 0.35
LINC00887-203ENST00000429578 LINC00523Q86TU6 105 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.24■□□□□ 0.357e-9■■■■■ 72.6
LINC00887-203ENST00000429578 VOPP1Q96AW1 172 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 PRRX2Q99811 253 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 TDRD1Q9BXT4 1180 aaKnown RBP17.24■□□□□ 0.35
LINC00887-203ENST00000429578 FRMD8Q9BZ67 464 aaPredicted RBP17.24■□□□□ 0.35
LINC00887-203ENST00000429578 ATP13A3Q9H7F0 1226 aa17.24■□□□□ 0.35
LINC00887-203ENST00000429578 NDRG2Q9UN36 371 aaKnown RBP17.24■□□□□ 0.35
LINC00887-203ENST00000429578 MRPS17Q9Y2R5 130 aaKnown RBP17.24■□□□□ 0.35
LINC00887-203ENST00000429578 LOC285095A0A1B0GVY8 99 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 GOLGA8MH3BSY2 632 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 SOCS5O75159 536 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 SIN3BO75182 1162 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 EPOP01588 193 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 EPHX1P07099 455 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 CA4P22748 312 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 AVPR2P30518 371 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 NTSR1P30989 418 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 GKP32189 559 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 NHLH1Q02575 133 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 BCL2L1Q07817 233 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 SPARCL1Q14515 664 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 ELAVL3Q14576 367 aaKnown RBP17.23■□□□□ 0.35
LINC00887-203ENST00000429578 C9orf64Q5T6V5 341 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 SDE2Q6IQ49 451 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 RANBP10Q6VN20 620 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 PPP1R21Q6ZMI0 780 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 TRMT11Q7Z4G4 463 aaKnown RBP17.23■□□□□ 0.35
LINC00887-203ENST00000429578 IL17RCQ8NAC3 791 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 CHST14Q8NCH0 376 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 LRIG1Q96JA1 1093 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 FEM1CQ96JP0 617 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 TBL1YQ9BQ87 522 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 HEPHQ9BQS7 1158 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 ZDHHC6Q9H6R6 413 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 MTRF1LQ9UGC7 380 aaKnown RBP17.23■□□□□ 0.35
LINC00887-203ENST00000429578 PCDHGC4Q9Y5F7 938 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 RAI2Q9Y5P3 530 aa17.23■□□□□ 0.35
LINC00887-203ENST00000429578 ZNF318Q5VUA4 2279 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 RNF40O75150 1001 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 USP12O75317 370 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 AGTP01019 485 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 MYBL2P10244 700 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 SERPINA4P29622 427 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 GRIA1P42261 906 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 CDK18Q07002 472 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 TRAF2Q12933 501 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 OLIG2Q13516 323 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 ZNF534Q76KX8 674 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 CAMK1DQ8IU85 385 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 SIX5Q8N196 739 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 ZNF687Q8N1G0 1237 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 ZCCHC9Q8N567 271 aaKnown RBP17.22■□□□□ 0.35
LINC00887-203ENST00000429578 PRSS33Q8NF86 280 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 IFT43Q96FT9 208 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 SERPINB12Q96P63 405 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 FMO2Q99518 471 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 GABRG3Q99928 467 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 FICDQ9BVA6 458 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 FOXP3Q9BZS1 431 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 XAB2Q9HCS7 855 aaKnown RBP17.22■□□□□ 0.35
LINC00887-203ENST00000429578 IL36AQ9UHA7 158 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 WASF2Q9Y6W5 498 aa17.22■□□□□ 0.35
LINC00887-203ENST00000429578 KANSL1LA0AUZ9 987 aa17.21■□□□□ 0.35
LINC00887-203ENST00000429578 TRAFD1O14545 582 aaPredicted RBP17.21■□□□□ 0.35
LINC00887-203ENST00000429578 ALOX15BO15296 676 aa17.21■□□□□ 0.35
LINC00887-203ENST00000429578 PIGNO95427 931 aa17.21■□□□□ 0.35
LINC00887-203ENST00000429578 CHRNB1P11230 501 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms