RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 PLGLB1Q02325 96 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 ZP2Q05996 745 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 ALFQ53S48 1182 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 TCEAL5Q5H9L2 206 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 KCTD16Q68DU8 428 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 SLC36A4Q6YBV0 504 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 SLC47A2Q86VL8 602 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 FAM98AQ8NCA5 519 aaKnown RBP7.3□□□□□ -1.24
CNOT4-206ENST00000428680 LMLNQ96KR4 655 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 TMEM237Q96Q45 408 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 TNKS2Q9H2K2 1166 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 FAM83DQ9H4H8 585 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 CRTAC1Q9NQ79 661 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 KBTBD4Q9NVX7 518 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 CDC14AQ9UNH5 594 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 GTF2A1LQ9UNN4 478 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 A0A0G2JND7 137 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 A8MU76 341 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 GALR2O43603 387 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 CD86P42081 329 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 AP5B1Q2VPB7 878 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ICE2Q659A1 982 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 C12orf29Q8N999 325 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 Q8N9G6 341 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 OR9Q1Q8NGQ5 310 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.29□□□□□ -1.245e-8■■■■■ 65.3
CNOT4-206ENST00000428680 MYO19Q96H55 970 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 JSRP1Q96MG2 331 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 FAIM2Q9BWQ8 316 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 Q9H521 79 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 DHX33Q9H6R0 707 aaKnown RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 MPP6Q9NZW5 540 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 STK38LQ9Y2H1 464 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 NEU2Q9Y3R4 380 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 COL4A4P53420 1690 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 CHUKO15111 745 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 FOXP2O15409 715 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 PSTPIP1O43586 416 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 TPH1P17752 444 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 PFKLP17858 780 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 GATMP50440 423 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 SERPINH1P50454 418 aaKnown RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 NEK3P51956 506 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 CCNG1P51959 295 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 RALGDSQ12967 914 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ELMO3Q96BJ8 720 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 OTUB2Q96DC9 234 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 CEP295NLQ96MC4 621 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 BTBD9Q96Q07 612 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ACOX2Q99424 681 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 FRMD8P1Q9BZ68 369 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 WDR26Q9H7D7 661 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ZNF556Q9HAH1 456 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 AVENQ9NQS1 362 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 IARS2Q9NSE4 1012 aaKnown RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ADA2Q9NZK5 511 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 PLAGL2Q9UPG8 496 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 SNX8Q9Y5X2 465 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 USP27XA6NNY8 438 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 TISP43B9A030 160 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 OPHN1O60890 802 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 SH3BGRLO75368 114 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 GLI1P08151 1106 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 NTSP30990 170 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 SLC7A5Q01650 507 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 OTUD4Q01804 1114 aaKnown RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ABRQ12979 859 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 TSNAXIP1Q2TAA8 658 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ATP13A5Q4VNC0 1218 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 MIIPQ5JXC2 388 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ZDHHC20Q5W0Z9 365 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 WDR59Q6PJI9 974 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 PRUNE1Q86TP1 453 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 SLC9A9Q8IVB4 645 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 CDK20Q8IZL9 346 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 OR5B17Q8NGF7 314 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 FOXP3Q9BZS1 431 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 PAGE1O75459 146 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 PAPLNO95428 1278 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 CHRNA1P02708 482 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 JAK1P23458 1154 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 OXTRP30559 389 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 YBEYP58557 167 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ECT2LQ008S8 904 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ALDH6A1Q02252 535 aaKnown RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ILF2Q12905 390 aaKnown RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ANKRD20A4Q4UJ75 823 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ANKRD20A2Q5SQ80 823 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 LY6G5CQ5SRR4 150 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 ANKRD20A1Q5TYW2 823 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 RNF43Q68DV7 783 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 LRRC8EQ6NSJ5 796 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 C16orf46Q6P387 395 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 DNASE1L2Q92874 299 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 TMEM125Q96AQ2 219 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 HSD17B14Q9BPX1 270 aa7.29□□□□□ -1.24
CNOT4-206ENST00000428680 MRPL45Q9BRJ2 306 aaKnown RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 KRCC1Q9NPI7 259 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-206ENST00000428680 MRPL40Q9NQ50 206 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms