RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 EXOC2Q96KP1 924 aa27.57■■■□□ 2
LMO1-202ENST00000428101 SNRNP25Q9BV90 132 aaKnown RBP27.57■■■□□ 2
LMO1-202ENST00000428101 CPEB1Q9BZB8 566 aaKnown RBP27.57■■■□□ 2
LMO1-202ENST00000428101 DHX35Q9H5Z1 703 aaKnown RBP27.57■■■□□ 2
LMO1-202ENST00000428101 UBA2Q9UBT2 640 aaPredicted RBP27.57■■■□□ 2
LMO1-202ENST00000428101 KLF15Q9UIH9 416 aa27.57■■■□□ 2
LMO1-202ENST00000428101 LRRK1Q38SD2 2015 aa27.57■■■□□ 2
LMO1-202ENST00000428101 EEF2KO00418 725 aaKnown RBP27.56■■■□□ 2
LMO1-202ENST00000428101 CSF2P04141 144 aa27.56■■■□□ 2
LMO1-202ENST00000428101 NDST2P52849 883 aa27.56■■■□□ 2
LMO1-202ENST00000428101 INSM1Q01101 510 aaPredicted RBP27.56■■■□□ 2
LMO1-202ENST00000428101 PDE1CQ14123 709 aaPredicted RBP27.56■■■□□ 2
LMO1-202ENST00000428101 FNIP1Q8TF40 1166 aa27.56■■■□□ 2
LMO1-202ENST00000428101 KCTD15Q96SI1 283 aaPredicted RBP27.56■■■□□ 2
LMO1-202ENST00000428101 EDEM3Q9BZQ6 932 aa27.56■■■□□ 2
LMO1-202ENST00000428101 SLC39A8Q9C0K1 460 aa27.56■■■□□ 2
LMO1-202ENST00000428101 DONSONQ9NYP3 566 aa27.56■■■□□ 2
LMO1-202ENST00000428101 NLGN3Q9NZ94 848 aa27.56■■■□□ 2
LMO1-202ENST00000428101 CNOT8Q9UFF9 292 aaKnown RBP27.56■■■□□ 2
LMO1-202ENST00000428101 EIF3CLB5ME19 914 aaKnown RBP27.55■■■□□ 2
LMO1-202ENST00000428101 SCAMP1O15126 338 aa27.55■■■□□ 2
LMO1-202ENST00000428101 PRAMEF11O60813 436 aa27.55■■■□□ 2
LMO1-202ENST00000428101 MMP20O60882 483 aa27.55■■■□□ 2
LMO1-202ENST00000428101 PIGNO95427 931 aa27.55■■■□□ 2
LMO1-202ENST00000428101 SKILP12757 684 aa27.55■■■□□ 2
LMO1-202ENST00000428101 NME1P15531 152 aaKnown RBP27.55■■■□□ 2
LMO1-202ENST00000428101 MIPP30301 263 aa27.55■■■□□ 2
LMO1-202ENST00000428101 HNRNPKP61978 463 aaKnown RBP eCLIP27.55■■■□□ 2
LMO1-202ENST00000428101 KLHL30Q0D2K2 578 aa27.55■■■□□ 2
LMO1-202ENST00000428101 HS1BP3Q53T59 392 aa27.55■■■□□ 2
LMO1-202ENST00000428101 C19orf48Q6RUI8 117 aa27.55■■■□□ 2
LMO1-202ENST00000428101 PARGQ86W56 976 aa27.55■■■□□ 2
LMO1-202ENST00000428101 EIF3CQ99613 913 aaKnown RBP27.55■■■□□ 2
LMO1-202ENST00000428101 CACNA1GO43497 2377 aa27.55■■■□□ 2
LMO1-202ENST00000428101 NEBLO76041 1014 aa27.54■■■□□ 2
LMO1-202ENST00000428101 CKMT1AP12532 417 aa27.54■■■□□ 2
LMO1-202ENST00000428101 PAPOLAP51003 745 aaKnown RBP27.54■■■□□ 2
LMO1-202ENST00000428101 DAB2P98082 770 aa27.54■■■□□ 2
LMO1-202ENST00000428101 EIF2B5Q13144 721 aaKnown RBP27.54■■■□□ 2
LMO1-202ENST00000428101 AFMIDQ63HM1 303 aa27.54■■■□□ 2
LMO1-202ENST00000428101 RFX8Q6ZV50 586 aa27.54■■■□□ 2
LMO1-202ENST00000428101 ZNF548Q8NEK5 533 aaPredicted RBP27.54■■■□□ 2
LMO1-202ENST00000428101 APOLD1Q96LR9 279 aa27.54■■■□□ 2
LMO1-202ENST00000428101 IPO11Q9UI26 975 aaKnown RBP27.54■■■□□ 2
LMO1-202ENST00000428101 ITPR1Q14643 2758 aa27.53■■■□□ 2
LMO1-202ENST00000428101 LY6G6EA0A0G2JKS1 128 aa27.53■■■□□ 2
LMO1-202ENST00000428101 NEMP2A6NFY4 417 aa27.53■■■□□ 2
LMO1-202ENST00000428101 K7ESM1 405 aa27.53■■■□□ 2
LMO1-202ENST00000428101 TM7SF2O76062 418 aa27.53■■■□□ 2
LMO1-202ENST00000428101 RNF8O76064 485 aa27.53■■■□□ 2
LMO1-202ENST00000428101 MYF5P13349 255 aa27.53■■■□□ 2
LMO1-202ENST00000428101 IGFALSP35858 605 aa27.53■■■□□ 2
LMO1-202ENST00000428101 VPS36Q86VN1 386 aa27.53■■■□□ 2
LMO1-202ENST00000428101 ARHGAP12Q8IWW6 846 aa27.53■■■□□ 2
LMO1-202ENST00000428101 CACTIN-AS1Q8N1I8 211 aa27.53■■■□□ 2
LMO1-202ENST00000428101 FAM181AQ8N9Y4 354 aa27.53■■■□□ 2
LMO1-202ENST00000428101 HCAR2Q8TDS4 363 aa27.53■■■□□ 2
LMO1-202ENST00000428101 CXorf40AQ8TE69 158 aa27.53■■■□□ 2
LMO1-202ENST00000428101 ZNF653Q96CK0 615 aa27.53■■■□□ 2
LMO1-202ENST00000428101 U3KQA8 63 aa27.53■■■□□ 2
LMO1-202ENST00000428101 ANKRD36A6QL64 1941 aa27.53■■■□□ 2
LMO1-202ENST00000428101 ASXL3Q9C0F0 2248 aa27.52■■■□□ 2
LMO1-202ENST00000428101 TSPAN11A1L157 253 aa27.52■■■□□ 2
LMO1-202ENST00000428101 ARHGAP42A6NI28 874 aa27.52■■■□□ 2
LMO1-202ENST00000428101 PRPSAP2O60256 369 aa27.52■■■□□ 2
LMO1-202ENST00000428101 BUB1BO60566 1050 aaPredicted RBP27.52■■■□□ 2
LMO1-202ENST00000428101 LRCH4O75427 683 aa27.52■■■□□ 2
LMO1-202ENST00000428101 SERPINC1P01008 464 aa27.52■■■□□ 2
LMO1-202ENST00000428101 ALPPL2P10696 532 aa27.52■■■□□ 2
LMO1-202ENST00000428101 ERCC2P18074 760 aa27.52■■■□□ 2
LMO1-202ENST00000428101 E2F1Q01094 437 aa27.52■■■□□ 2
LMO1-202ENST00000428101 TMEM52BQ4KMG9 183 aa27.52■■■□□ 2
LMO1-202ENST00000428101 FIGNQ5HY92 759 aa27.52■■■□□ 2
LMO1-202ENST00000428101 NCAPGQ9BPX3 1015 aa27.52■■■□□ 2
LMO1-202ENST00000428101 WRAP53Q9BUR4 548 aaKnown RBP27.52■■■□□ 2
LMO1-202ENST00000428101 DUSP23Q9BVJ7 150 aa27.52■■■□□ 2
LMO1-202ENST00000428101 ISCUQ9H1K1 167 aa27.52■■■□□ 2
LMO1-202ENST00000428101 SUV39H2Q9H5I1 410 aa27.52■■■□□ 2
LMO1-202ENST00000428101 MBNL1Q9NR56 388 aaKnown RBP27.52■■■□□ 2
LMO1-202ENST00000428101 PNMA8BQ9ULN7 279 aaPredicted RBP27.52■■■□□ 2
LMO1-202ENST00000428101 JUNDP17535 347 aa27.51■■□□□ 1.99
LMO1-202ENST00000428101 RGRP47804 291 aa27.51■■□□□ 1.99
LMO1-202ENST00000428101 SUOXP51687 545 aa27.51■■□□□ 1.99
LMO1-202ENST00000428101 KLHL40Q2TBA0 621 aa27.51■■□□□ 1.99
LMO1-202ENST00000428101 COL28A1Q2UY09 1125 aa27.51■■□□□ 1.99
LMO1-202ENST00000428101 PPP6R3Q5H9R7 873 aaPredicted RBP27.51■■□□□ 1.99
LMO1-202ENST00000428101 PSTKQ8IV42 348 aaKnown RBP27.51■■□□□ 1.99
LMO1-202ENST00000428101 NPWQ8N729 165 aa27.51■■□□□ 1.99
LMO1-202ENST00000428101 DCBLD1Q8N8Z6 715 aa27.51■■□□□ 1.99
LMO1-202ENST00000428101 TP53I13Q8NBR0 393 aaPredicted RBP27.51■■□□□ 1.99
LMO1-202ENST00000428101 HNRNPLLQ8WVV9 542 aaKnown RBP27.51■■□□□ 1.99
LMO1-202ENST00000428101 NXPE2Q96DL1 559 aa27.51■■□□□ 1.99
LMO1-202ENST00000428101 NRSN2Q9GZP1 204 aa27.51■■□□□ 1.99
LMO1-202ENST00000428101 CLCA2Q9UQC9 943 aa27.51■■□□□ 1.99
LMO1-202ENST00000428101 CSNK1G3Q9Y6M4 447 aa27.51■■□□□ 1.99
LMO1-202ENST00000428101 SCINQ9Y6U3 715 aa27.51■■□□□ 1.99
LMO1-202ENST00000428101 H3BM21 787 aa27.5■■□□□ 1.99
LMO1-202ENST00000428101 DAPK3O43293 454 aa27.5■■□□□ 1.99
LMO1-202ENST00000428101 GRM3Q14832 879 aa27.5■■□□□ 1.99
LMO1-202ENST00000428101 RTP5Q14D33 572 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms