RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PBX1P40424 430 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 GNAQP50148 359 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 HTR6P50406 440 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 KRT83P78385 493 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 ICA1Q05084 483 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 CUL4BQ13620 913 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 SMC1AQ14683 1233 aaKnown RBP5.35□□□□□ -1.55
LINC00458-202ENST00000427299 STARD3Q14849 445 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 RAB30Q15771 203 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 SLC4A8Q2Y0W8 1093 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 CAVIN4Q5BKX8 364 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 ZNF658Q5TYW1 1059 aaPredicted RBP5.35□□□□□ -1.55
LINC00458-202ENST00000427299 TLDC1Q6P9B6 456 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 TMTC3Q6ZXV5 915 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 KCTD20Q7Z5Y7 419 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 SIRT6Q8N6T7 355 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 ZNF527Q8NB42 609 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 RASSF8Q8NHQ8 419 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 OSR1Q8TAX0 266 aaPredicted RBP5.35□□□□□ -1.55
LINC00458-202ENST00000427299 BPIFB1Q8TDL5 484 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 LRRC46Q96FV0 321 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 LYZL4Q96KX0 146 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 NUP58Q9BVL2 599 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 MAGEB5Q9BZ81 275 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 CRNKL1Q9BZJ0 848 aaKnown RBP5.35□□□□□ -1.55
LINC00458-202ENST00000427299 THAP9Q9H5L6 903 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 HAUS4Q9H6D7 363 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 VIPAS39Q9H9C1 493 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 AGO4Q9HCK5 861 aaKnown RBP5.35□□□□□ -1.55
LINC00458-202ENST00000427299 SH3GLB2Q9NR46 395 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 ABHD10Q9NUJ1 306 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 ZSCAN32Q9NX65 697 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.35□□□□□ -1.55
LINC00458-202ENST00000427299 ADD3Q9UEY8 706 aaKnown RBP5.35□□□□□ -1.55
LINC00458-202ENST00000427299 LIMA1Q9UHB6 759 aaKnown RBP5.35□□□□□ -1.55
LINC00458-202ENST00000427299 HDAC9Q9UKV0 1011 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 RAB21Q9UL25 225 aa5.35□□□□□ -1.55
LINC00458-202ENST00000427299 GREB1LQ9C091 1923 aaPredicted RBP5.35□□□□□ -1.55
LINC00458-202ENST00000427299 RBBP6Q7Z6E9 1792 aaKnown RBP5.34□□□□□ -1.55
LINC00458-202ENST00000427299 BAZ2BQ9UIF8 2168 aaKnown RBP5.34□□□□□ -1.55
LINC00458-202ENST00000427299 A0A0U1RQG5 324 aaPredicted RBP5.34□□□□□ -1.55
LINC00458-202ENST00000427299 TARSL2A2RTX5 802 aaKnown RBP5.34□□□□□ -1.55
LINC00458-202ENST00000427299 FAM90A8PA6NJQ4 464 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 LGALS16A8MUM7 142 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 KCNJ18B7U540 433 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 NPC1O15118 1278 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 CNOT3O75175 753 aaKnown RBP5.34□□□□□ -1.55
LINC00458-202ENST00000427299 FGFR1OPO95684 399 aaKnown RBP5.34□□□□□ -1.55
LINC00458-202ENST00000427299 MT-CO3P00414 261 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 CSTBP04080 98 aaKnown RBP5.34□□□□□ -1.55
LINC00458-202ENST00000427299 GYPCP04921 128 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 FAM90A13PP0C7W8 464 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 FAM90A24PP0C7X0 464 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 CYP19A1P11511 503 aaPredicted RBP5.34□□□□□ -1.55
LINC00458-202ENST00000427299 SCG2P13521 617 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 STAT6P42226 847 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 PTDSS1P48651 473 aaKnown RBP5.34□□□□□ -1.55
LINC00458-202ENST00000427299 COPB1P53618 953 aaKnown RBP5.34□□□□□ -1.55
LINC00458-202ENST00000427299 PTK2BQ14289 1009 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 KCNJ12Q14500 433 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 KCNB1Q14721 858 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 KARSQ15046 597 aaKnown RBP5.34□□□□□ -1.55
LINC00458-202ENST00000427299 PTCHD3Q3KNS1 767 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 ISM2Q6H9L7 571 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 KLHL10Q6JEL2 608 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 WDR93Q6P2C0 686 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 CTR9Q6PD62 1173 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 DLK2Q6UY11 383 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 ZNF34Q8IZ26 560 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 CACNA2D3Q8IZS8 1091 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 ZNF713Q8N859 430 aaPredicted RBP5.34□□□□□ -1.55
LINC00458-202ENST00000427299 MPP4Q96JB8 637 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 SNX27Q96L92 541 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 CCDC17Q96LX7 622 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 AK8Q96MA6 479 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 ALS2CR12Q96Q35 445 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 WDR24Q96S15 920 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 UBXN6Q9BZV1 441 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 HEYLQ9NQ87 328 aaPredicted RBP5.34□□□□□ -1.55
LINC00458-202ENST00000427299 IGSF9Q9P2J2 1179 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 PI4KBQ9UBF8 816 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 KCNJ14Q9UNX9 436 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 ZBTB1Q9Y2K1 713 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 GPR52Q9Y2T5 361 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 CEP83Q9Y592 693 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 MYH11P35749 1972 aa5.34□□□□□ -1.55
LINC00458-202ENST00000427299 OR2W5A6NFC9 320 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 AQP7P3A6NL99 342 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 PSMD14O00487 310 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 MAP2K7O14733 419 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 TLR2O60603 784 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 USO1O60763 962 aaKnown RBP5.33□□□□□ -1.56
LINC00458-202ENST00000427299 VEGFAP15692 232 aaPredicted RBP5.33□□□□□ -1.56
LINC00458-202ENST00000427299 TPH1P17752 444 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 EGR1P18146 543 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 GKP32189 559 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 CCT6AP40227 531 aaKnown RBP5.33□□□□□ -1.56
LINC00458-202ENST00000427299 PRPHP41219 470 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 NLRP5P59047 1200 aa5.33□□□□□ -1.56
LINC00458-202ENST00000427299 CFHR1Q03591 330 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms