RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 EMID1Q96A84 441 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-214ENST00000427183 PANX3Q96QZ0 392 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 SYT15Q9BQS2 421 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 PLEKHG2Q9H7P9 1386 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 TRNAU1APQ9NX07 287 aaKnown RBP12.64□□□□□ -0.39
HDLBP-214ENST00000427183 C3orf18Q9UK00 162 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 RPS6KA6Q9UK32 745 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 SNX6Q9UNH7 406 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 OAS3Q9Y6K5 1087 aaKnown RBP12.64□□□□□ -0.39
HDLBP-214ENST00000427183 SLIT3O75094 1523 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 MCIDASD6RGH6 385 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 GTPBP1O00178 669 aaKnown RBP12.64□□□□□ -0.39
HDLBP-214ENST00000427183 ZNF549Q6P9A3 640 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 RBM43Q6ZSC3 357 aaKnown RBP12.64□□□□□ -0.39
HDLBP-214ENST00000427183 GALNT5Q7Z7M9 940 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 WDR49Q8IV35 697 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 SLC34A3Q8N130 599 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 ZNF615Q8N8J6 731 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 LRRN4Q8WUT4 740 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 PIH1D2Q8WWB5 315 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 FNDC11Q9BVV2 318 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 RASSF1Q9NS23 344 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 KCNK4Q9NYG8 393 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 SPG21Q9NZD8 308 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 BANF1O75531 89 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 ALADP13716 330 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 ATF4P18848 351 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-214ENST00000427183 FBXO47Q5MNV8 452 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 TRIM40Q6P9F5 258 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 POMZP3Q6PJE2 187 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 MSANTD1Q6ZTZ1 278 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 PTGR2Q8N8N7 351 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-214ENST00000427183 TSEN2Q8NCE0 465 aaKnown RBP12.64□□□□□ -0.39
HDLBP-214ENST00000427183 PSMD13Q9UNM6 376 aa12.64□□□□□ -0.39
HDLBP-214ENST00000427183 MTF2Q9Y483 593 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-214ENST00000427183 MST1RQ04912 1400 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 CCNKO75909 580 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 SHBGP04278 402 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 ALDH3A2P51648 485 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 RIPK1Q13546 671 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 PAGE2BQ5JRK9 111 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 SV2AQ7L0J3 742 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 TEX47Q8TBZ9 253 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 STARD8Q92502 1023 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 PRKD2Q9BZL6 878 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 CHST7Q9NS84 486 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 ZNF180Q9UJW8 692 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 LRRC37A3O60309 1634 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 A0A075B6Q4 140 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 CHP2O43745 196 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 LSM8O95777 96 aaKnown RBP12.63□□□□□ -0.39
HDLBP-214ENST00000427183 IGSF6O95976 241 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 TOP3BO95985 862 aaKnown RBP12.63□□□□□ -0.39
HDLBP-214ENST00000427183 VIL1P09327 827 aaKnown RBP12.63□□□□□ -0.39
HDLBP-214ENST00000427183 CTSEP14091 401 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 TAL1P17542 331 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-214ENST00000427183 CAPGP40121 348 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 NR1H2P55055 460 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 SLC5A9Q2M3M2 681 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 ZFP69Q49AA0 526 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 TTI2Q6NXR4 508 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 SAMD7Q7Z3H4 446 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 DEFB106AQ8N104 65 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 SFRP1Q8N474 314 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 ZNF433Q8N7K0 673 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-214ENST00000427183 OR52K1Q8NGK4 314 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 AP3S1Q92572 193 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 C1GALT1C1Q96EU7 318 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 IFNA6P05013 189 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 USP17L7P0C7H9 530 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 GALNT3Q14435 633 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 CXorf57Q6NSI4 855 aaKnown RBP12.63□□□□□ -0.39
HDLBP-214ENST00000427183 UBE2J2Q8N2K1 259 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 HAVCR1Q96D42 359 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 B3GALT6Q96L58 329 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 NEK6Q9HC98 313 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 ZNHIT2Q9UHR6 403 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 H0Y858 1186 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 ERAL1O75616 437 aaKnown RBP12.63□□□□□ -0.39
HDLBP-214ENST00000427183 SUPT20HL2P0C7V6 817 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 LINC00032P0C843 101 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 TRIM28Q13263 835 aaKnown RBP12.63□□□□□ -0.39
HDLBP-214ENST00000427183 PIK3R6Q5UE93 754 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 CD302Q8IX05 232 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 TBC1D10AQ9BXI6 508 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 TKTL2Q9H0I9 626 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 ATP6AP2A0A1C7CYW4 349 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 ATP6AP2O75787 350 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 ALDH2P05091 517 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 PFKPQ01813 784 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 DPYSL3Q14195 570 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 MTX3Q5HYI7 312 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 ARMC12Q5T9G4 340 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 OVOS1Q6IE37 1185 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 SULT1C3Q6IMI6 304 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 BHLHB9Q6PI77 547 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 DHDDSQ86SQ9 333 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 DEPDC4Q8N2C3 294 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 ENGASEQ8NFI3 743 aa12.63□□□□□ -0.39
HDLBP-214ENST00000427183 OR8H1Q8NGG4 311 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms