RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 BBS7Q8IWZ6 715 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 ARHGAP18Q8N392 663 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 OXR1Q8N573 874 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 CAMKK1Q8N5S9 505 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 CHST14Q8NCH0 376 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 NDRG1Q92597 394 aaKnown RBP6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 KAT5Q92993 513 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 WBP2Q969T9 261 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 OTUB2Q96DC9 234 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 WBP1Q96G27 269 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 PNKPQ96T60 521 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 JAM3Q9BX67 310 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 CLSTN2Q9H4D0 955 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 LRRC4Q9HBW1 653 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 UBE2TQ9NPD8 197 aaPredicted RBP6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 SPHK2Q9NRA0 654 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 CATSPERZQ9NTU4 200 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 CLIC5Q9NZA1 410 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 GULP1Q9UBP9 304 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 LSM7Q9UK45 103 aaKnown RBP6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 TSPAN16Q9UKR8 245 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 ACSL6Q9UKU0 697 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 THADAQ6YHU6 1953 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 F5P12259 2224 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 NOTCH2Q04721 2471 aa6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 NUP210Q8TEM1 1887 aaPredicted RBP6.43□□□□□ -1.38
NIF3L1-207ENST00000426253 ADAMTS9Q9P2N4 1935 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 TBC1D3BA6NDS4 549 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 KIAA1324LA8MWY0 1029 aaPredicted RBP6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 C22orf46C9J442 243 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 TULP2O00295 520 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 O00370 1275 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 NEMP1O14524 444 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 XPO1O14980 1071 aaKnown RBP6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 MDM4O15151 490 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 NRDCO43847 1150 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 ZBED1O96006 694 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 APODP05090 189 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 CYP17A1P05093 508 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 HMBSP08397 361 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 HLA-EP13747 358 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 SLC9A1P19634 815 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 CR2P20023 1033 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 FUT4P22083 530 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 EIF2DP41214 584 aaKnown RBP6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 TNFRSF4P43489 277 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 CD97P48960 835 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 DGKEP52429 567 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 BCAT1P54687 386 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 YWHAGP61981 247 aaKnown RBP eCLIP6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 COG7P83436 770 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 SEMG2Q02383 582 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 GCNT1Q02742 428 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 BST2Q10589 180 aaKnown RBP6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 EFEMP1Q12805 493 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 GPR19Q15760 415 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 SLC14A2Q15849 920 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 PREPLQ4J6C6 727 aaPredicted RBP6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 LY6G5CQ5SRR4 150 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 EMC10Q5UCC4 262 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 HIST2H2BCQ6DN03 193 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 PM20D1Q6GTS8 502 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 LCLAT1Q6UWP7 414 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 CLEC17AQ6ZS10 378 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 CEP128Q6ZU80 1094 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 RSRC2Q7L4I2 434 aaKnown RBP6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 SYT13Q7L8C5 426 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 C11orf74Q86VG3 221 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 SPATS2Q86XZ4 545 aaKnown RBP6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 MIB1Q86YT6 1006 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 IRF2BP1Q8IU81 584 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 ARHGEF19Q8IW93 802 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 NXPE1Q8N323 547 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 LZTR1Q8N653 840 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 RPLP0P6Q8NHW5 317 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 SLC35F5Q8WV83 523 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 TFAP2BQ92481 460 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 CNOT6LQ96LI5 555 aaKnown RBP6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 MED15Q96RN5 788 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 CDK5RAP1Q96SZ6 601 aaKnown RBP6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 KCNJ15Q99712 375 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 ULBP1Q9BZM6 244 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 DCLK3Q9C098 648 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 INTS2Q9H0H0 1204 aaKnown RBP6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 EPB41L1Q9H4G0 881 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 LMBRD1Q9NUN5 540 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 POLR3BQ9NW08 1133 aaPredicted RBP6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 MARCH2Q9P0N8 246 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 WDR35Q9P2L0 1181 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 DEC1Q9P2X7 70 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 CBLCQ9ULV8 474 aa6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 ATXN2Q99700 1313 aaKnown RBP6.42□□□□□ -1.38
NIF3L1-207ENST00000426253 DENND4CQ5VZ89 1909 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 A0A1W2PQC6 194 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 SLC12A8A0AV02 714 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 FITM1A5D6W6 292 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 ANTXRLA6NF34 631 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 ZNF891A8MT65 544 aaPredicted RBP6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 MED7O43513 233 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms