RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 PGBD5Q8N414 524 aa13.78□□□□□ -0.2
SNX3-204ENST00000426155 PQLC3Q8N755 202 aa13.78□□□□□ -0.2
SNX3-204ENST00000426155 PANX2Q96RD6 677 aa13.78□□□□□ -0.2
SNX3-204ENST00000426155 ZNF670Q9BS34 389 aa13.78□□□□□ -0.2
SNX3-204ENST00000426155 WRAP53Q9BUR4 548 aaKnown RBP13.78□□□□□ -0.2
SNX3-204ENST00000426155 RCOR3Q9P2K3 495 aaPredicted RBP13.78□□□□□ -0.2
SNX3-204ENST00000426155 DMTF1Q9Y222 760 aa13.78□□□□□ -0.2
SNX3-204ENST00000426155 BTBD3Q9Y2F9 522 aa13.78□□□□□ -0.2
SNX3-204ENST00000426155 LRRD1A4D1F6 860 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 RCCD1A6NED2 376 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 IGLON5A6NGN9 336 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 PRAMEF26H0Y7S4 382 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 NEMP1O14524 444 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 AREL1O15033 823 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 AP1G1O43747 822 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 LCA5LO95447 670 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 KRT1P04264 644 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 TIMP2P16035 220 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 COMTP21964 271 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 HNRNPA2B1P22626 353 aaKnown RBP13.77□□□□□ -0.21
SNX3-204ENST00000426155 FECHP22830 423 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 KDELR1P24390 212 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 SERPINB6P35237 376 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 ARHGAP25P42331 645 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 CCT8P50990 548 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 NXPH1P58417 271 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 MAXP61244 160 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 GBE1Q04446 702 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 RAD51Q06609 339 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 CCDC15Q0P6D6 951 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 ZNF235Q14590 738 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 PDK2Q15119 407 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 SHBQ15464 509 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 LCE2DQ5TA82 110 aaPredicted RBP13.77□□□□□ -0.21
SNX3-204ENST00000426155 KIAA1161Q6NSJ0 714 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 NEK5Q6P3R8 708 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 TTC7BQ86TV6 843 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 SPC24Q8NBT2 197 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 TMEM145Q8NBT3 493 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 FAF2Q96CS3 445 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 CPEB1Q9BZB8 566 aaKnown RBP13.77□□□□□ -0.21
SNX3-204ENST00000426155 INTUQ9ULD6 942 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 REXO2Q9Y3B8 237 aaKnown RBP13.77□□□□□ -0.21
SNX3-204ENST00000426155 PCDHA13Q9Y5I0 950 aa13.77□□□□□ -0.21
SNX3-204ENST00000426155 TSPAN11A1L157 253 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 C3orf70A6NLC5 250 aaPredicted RBP13.76□□□□□ -0.21
SNX3-204ENST00000426155 UPK3BL1B0FP48 263 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 UPK3BL2E5RIL1 263 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 TLR4O00206 839 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 MMP20O60882 483 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 NDUFA10O95299 355 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 PAK4O96013 591 aaPredicted RBP13.76□□□□□ -0.21
SNX3-204ENST00000426155 THEGLP0DJG4 465 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 CEACAM1P13688 526 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 CYLC1P35663 651 aaPredicted RBP13.76□□□□□ -0.21
SNX3-204ENST00000426155 NOP2P46087 812 aaKnown RBP13.76□□□□□ -0.21
SNX3-204ENST00000426155 SCNN1BP51168 640 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 RPS21P63220 83 aaKnown RBP13.76□□□□□ -0.21
SNX3-204ENST00000426155 GALNT2Q10471 571 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 SLC14A1Q13336 389 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 RFTN1Q14699 578 aaPredicted RBP13.76□□□□□ -0.21
SNX3-204ENST00000426155 STAT4Q14765 748 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 PAFAH1B3Q15102 231 aaKnown RBP13.76□□□□□ -0.21
SNX3-204ENST00000426155 GATAD2AQ86YP4 633 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 TMEM139Q8IV31 216 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 CCDC170Q8IYT3 715 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 SLC22A18ASQ8N1D0 253 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 MFSD2AQ8NA29 543 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 ACRBPQ8NEB7 543 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 OR13H1Q8NG92 308 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 SETD7Q8WTS6 366 aaKnown RBP13.76□□□□□ -0.21
SNX3-204ENST00000426155 RAB7BQ96AH8 199 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 RNF25Q96BH1 459 aaPredicted RBP13.76□□□□□ -0.21
SNX3-204ENST00000426155 ZNF599Q96NL3 588 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 PSKH2Q96QS6 385 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 ELF4Q99607 663 aaPredicted RBP13.76□□□□□ -0.21
SNX3-204ENST00000426155 SLC17A9Q9BYT1 436 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 SLC32A1Q9H598 525 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 SUV39H2Q9H5I1 410 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 GDF3Q9NR23 364 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 SEPT3Q9UH03 358 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 LCMT1Q9UIC8 334 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 SALL4Q9UJQ4 1053 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 TPX2Q9ULW0 747 aaKnown RBP13.76□□□□□ -0.21
SNX3-204ENST00000426155 LRP4O75096 1905 aa13.76□□□□□ -0.21
SNX3-204ENST00000426155 A0A1B0GTQ1 180 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 POM121BA6NF01 834 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 TSPAN6O43657 245 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 SPOPO43791 374 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 CBFA2T3O75081 653 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 TOP3BO95985 862 aaKnown RBP13.75□□□□□ -0.21
SNX3-204ENST00000426155 ZNF883P0CG24 379 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 AKT2P31751 481 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 GARSP41250 739 aaKnown RBP13.75□□□□□ -0.21
SNX3-204ENST00000426155 MMP13P45452 471 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 MARCKSL1P49006 195 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 SIM1P81133 766 aaPredicted RBP13.75□□□□□ -0.21
SNX3-204ENST00000426155 FOXK2Q01167 660 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 SLC10A2Q12908 348 aaPredicted RBP13.75□□□□□ -0.21
SNX3-204ENST00000426155 TCEAL1Q15170 157 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms