RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 GBP2P32456 591 aaPredicted RBP17.53■□□□□ 0.4
FN1-208ENST00000426059 VIPR2P41587 438 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 CTSOP43234 321 aaPredicted RBP17.53■□□□□ 0.4
FN1-208ENST00000426059 SF3A3Q12874 501 aaKnown RBP eCLIP17.53■□□□□ 0.44e-14■■■■□ 23.7
FN1-208ENST00000426059 RFTN1Q14699 578 aaPredicted RBP17.53■□□□□ 0.4
FN1-208ENST00000426059 PTPRRQ15256 657 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 RARS2Q5T160 578 aaKnown RBP17.53■□□□□ 0.4
FN1-208ENST00000426059 SH2D5Q6ZV89 423 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 STRA8Q7Z7C7 330 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 NAT16Q8N8M0 369 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 FIBINQ8TAL6 211 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 BLOC1S5Q8TDH9 187 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 PDCD6IPQ8WUM4 868 aaKnown RBP17.53■□□□□ 0.4
FN1-208ENST00000426059 MYLIPQ8WY64 445 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 BBS2Q9BXC9 721 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 EPN3Q9H201 632 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 SLC17A7Q9P2U7 560 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 LHX3Q9UBR4 397 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 RFPL1O75677 317 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 KRT38O76015 456 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 ADRA1DP25100 572 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 GMPRP36959 345 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 RHOAP61586 193 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 LY6G5CQ5SRR4 150 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 MPP7Q5T2T1 576 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 CCDC117Q8IWD4 279 aaPredicted RBP17.52■□□□□ 0.4
FN1-208ENST00000426059 BANPQ8N9N5 519 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 DCAF4L2Q8NA75 395 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 TCP10LQ8TDR4 215 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 RSPRY1Q96DX4 576 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 SLC13A1Q9BZW2 595 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 TXNDC16Q9P2K2 825 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 GRID1Q9ULK0 1009 aa17.52■□□□□ 0.4
FN1-208ENST00000426059 ZNF197O14709 1029 aa17.52■□□□□ 0.39
FN1-208ENST00000426059 LINC01565O15544 149 aa17.52■□□□□ 0.39
FN1-208ENST00000426059 PRPF4O43172 522 aaKnown RBP eCLIP17.52■□□□□ 0.39
FN1-208ENST00000426059 STK19P49842 368 aaPredicted RBP17.52■□□□□ 0.39
FN1-208ENST00000426059 PLEKHG6Q3KR16 790 aa17.52■□□□□ 0.39
FN1-208ENST00000426059 TRIM68Q6AZZ1 485 aa17.52■□□□□ 0.39
FN1-208ENST00000426059 CDHR3Q6ZTQ4 885 aa17.52■□□□□ 0.39
FN1-208ENST00000426059 DENND1AQ8TEH3 1009 aa17.52■□□□□ 0.39
FN1-208ENST00000426059 CENPTQ96BT3 561 aa17.52■□□□□ 0.39
FN1-208ENST00000426059 KIAA1522Q9P206 1035 aaPredicted RBP17.52■□□□□ 0.39
FN1-208ENST00000426059 ARL5AQ9Y689 179 aa17.52■□□□□ 0.39
FN1-208ENST00000426059 A0A0U1RQS6 177 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 A6NNZ2 444 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 SP100P23497 879 aaPredicted RBP17.51■□□□□ 0.39
FN1-208ENST00000426059 GKP32189 559 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 PGGT1BP53609 377 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 TMPRSS15P98073 1019 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 CTBP1Q13363 440 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 KCNC3Q14003 757 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 TUBB8Q3ZCM7 444 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 LGSNQ5TDP6 509 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 FOXR1Q6PIV2 292 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 DENND6AQ8IWF6 608 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 ADGRG2Q8IZP9 1017 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 IRF7Q92985 503 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 RMDN1Q96DB5 314 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 FEM1CQ96JP0 617 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 TRIB3Q96RU7 358 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 C2orf49Q9BVC5 232 aaPredicted RBP17.51■□□□□ 0.39
FN1-208ENST00000426059 SPHK2Q9NRA0 654 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 TREX1Q9NSU2 369 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 PCMTD2Q9NV79 361 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 GMNCA6NCL1 334 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 PRLP01236 227 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 ITGA2BP08514 1039 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 TYRP14679 529 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 WEE1P30291 646 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 ARCN1P48444 511 aaKnown RBP17.51■□□□□ 0.39
FN1-208ENST00000426059 ACVR1CQ8NER5 493 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 NUDCD1Q96RS6 583 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 TNKS2Q9H2K2 1166 aa17.51■□□□□ 0.39
FN1-208ENST00000426059 SMG5Q9UPR3 1016 aaKnown RBP17.51■□□□□ 0.39
FN1-208ENST00000426059 HEATR9A2RTY3 570 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 AURKAO14965 403 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 ALDOAP04075 364 aaKnown RBP17.5■□□□□ 0.39
FN1-208ENST00000426059 SLC8A1P32418 973 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 USP4Q13107 963 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 FUT11Q495W5 492 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 INO80DQ53TQ3 878 aaPredicted RBP17.5■□□□□ 0.39
FN1-208ENST00000426059 LVRNQ6Q4G3 990 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 TDRD1Q9BXT4 1180 aaKnown RBP17.5■□□□□ 0.39
FN1-208ENST00000426059 RAI2Q9Y5P3 530 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 WDR91A4D1P6 747 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 GLP2RO95838 553 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 SLC4A1P02730 911 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 GP5P40197 560 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 SERPINB9P50453 376 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 SLC18A2Q05940 514 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 TRAF2Q12933 501 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 RAB30Q15771 203 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 QPCTQ16769 361 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 PITRM1Q5JRX3 1037 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 TSTD2Q5T7W7 516 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 PDPK2PQ6A1A2 396 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 LPCAT1Q8NF37 534 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 OR13J1Q8NGT2 312 aa17.5■□□□□ 0.39
FN1-208ENST00000426059 ZFYVE19Q96K21 471 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms