RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 PAPSS2O95340 614 aaPredicted RBP26.75■■□□□ 1.87
LDB1-202ENST00000425280 FGF1P05230 155 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 GABRB3P28472 473 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 SCNN1BP51168 640 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 CDH18Q13634 790 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 ZC3HC1Q86WB0 502 aaKnown RBP26.75■■□□□ 1.87
LDB1-202ENST00000425280 DENND6AQ8IWF6 608 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 ALG14Q96F25 216 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 VPS28Q9UK41 221 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 INSIG1O15503 277 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 GLRA3O75311 464 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 CSKP41240 450 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 GALNT3Q14435 633 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 RTL10Q7L3V2 364 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 RNF135Q8IUD6 432 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 DDI1Q8WTU0 396 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 RHOJQ9H4E5 214 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 GGT7Q9UJ14 662 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 AHSGP02765 367 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 EPCAMP16422 314 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 BGNP21810 368 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 CTBP1Q13363 440 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 THOC5Q13769 683 aaKnown RBP26.74■■□□□ 1.87
LDB1-202ENST00000425280 GPR158Q5T848 1215 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 KYAT3Q6YP21 454 aaKnown RBP26.74■■□□□ 1.87
LDB1-202ENST00000425280 MFN1Q8IWA4 741 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 ACVR1CQ8NER5 493 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 OR13J1Q8NGT2 312 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 LBHD1Q9BQE6 289 aaPredicted RBP26.74■■□□□ 1.87
LDB1-202ENST00000425280 CAB39LQ9H9S4 337 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 SCUBE2Q9NQ36 999 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 DNMT3BQ9UBC3 853 aaKnown RBP26.74■■□□□ 1.87
LDB1-202ENST00000425280 DCDC2Q9UHG0 476 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 EMCNQ9ULC0 261 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 ARHGAP26Q9UNA1 814 aa26.74■■□□□ 1.87
LDB1-202ENST00000425280 HELZP42694 1942 aaKnown RBP26.73■■□□□ 1.87
LDB1-202ENST00000425280 MOSPD3O75425 235 aa26.73■■□□□ 1.87
LDB1-202ENST00000425280 TMCC1O94876 653 aa26.73■■□□□ 1.87
LDB1-202ENST00000425280 PTPN2P17706 415 aa26.73■■□□□ 1.87
LDB1-202ENST00000425280 MPP1Q00013 466 aa26.73■■□□□ 1.87
LDB1-202ENST00000425280 GRM3Q14832 879 aa26.73■■□□□ 1.87
LDB1-202ENST00000425280 GPR22Q99680 433 aa26.73■■□□□ 1.87
LDB1-202ENST00000425280 MECRQ9BV79 373 aa26.73■■□□□ 1.87
LDB1-202ENST00000425280 LDB2O43679 373 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 NDST3O95803 873 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 SLC1A2P43004 574 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 UGP2Q16851 508 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 N4BP2L1Q5TBK1 243 aaPredicted RBP26.72■■□□□ 1.87
LDB1-202ENST00000425280 C16orf46Q6P387 395 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 OTOAQ7RTW8 1153 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 YTHDF3Q7Z739 585 aaKnown RBP26.72■■□□□ 1.87
LDB1-202ENST00000425280 NUDCD1Q96RS6 583 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 FAM167BQ9BTA0 163 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 VPS51Q9UID3 782 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 RRP15Q9Y3B9 282 aaKnown RBP26.72■■□□□ 1.87
LDB1-202ENST00000425280 GRXCR1A8MXD5 290 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 ANKRD65E5RJM6 399 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 CLASP2O75122 1294 aaKnown RBP26.72■■□□□ 1.87
LDB1-202ENST00000425280 FGF19O95750 216 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 NEFHP12036 1026 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 CES1P23141 567 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 GMPRP36959 345 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 TEAD2Q15562 447 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 MPPE1Q53F39 396 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 NEPROQ6NW34 567 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 NLRP9Q7RTR0 991 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 CCDC63Q8NA47 563 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 C2CD4AQ8NCU7 369 aaPredicted RBP26.72■■□□□ 1.87
LDB1-202ENST00000425280 SH3RF2Q8TEC5 729 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 CCL26Q9Y258 94 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 KCTD3Q9Y597 815 aa26.72■■□□□ 1.87
LDB1-202ENST00000425280 KIAA0754O94854 1291 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 PRKCGP05129 697 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 RB1P06400 928 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 DLG2Q15700 870 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 INSCQ1MX18 579 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 MPP7Q5T2T1 576 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 ZNF470Q6ECI4 717 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 TPGS1Q6ZTW0 290 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 SRLQ86TD4 932 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 DCAF4L2Q8NA75 395 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 PLK2Q9NYY3 685 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 LHX3Q9UBR4 397 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 CHKBQ9Y259 395 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 ARL2BPQ9Y2Y0 163 aa26.71■■□□□ 1.87
LDB1-202ENST00000425280 E2F8A0AVK6 867 aa26.7■■□□□ 1.87
LDB1-202ENST00000425280 MPOP05164 745 aa26.7■■□□□ 1.87
LDB1-202ENST00000425280 RHOP08100 348 aa26.7■■□□□ 1.87
LDB1-202ENST00000425280 HADHAP40939 763 aa26.7■■□□□ 1.87
LDB1-202ENST00000425280 INO80DQ53TQ3 878 aaPredicted RBP26.7■■□□□ 1.87
LDB1-202ENST00000425280 FAM109BQ6ICB4 259 aaPredicted RBP26.7■■□□□ 1.87
LDB1-202ENST00000425280 CMTM8Q8IZV2 173 aa26.7■■□□□ 1.87
LDB1-202ENST00000425280 BLOC1S5Q8TDH9 187 aa26.7■■□□□ 1.87
LDB1-202ENST00000425280 SIRPGQ9P1W8 387 aa26.7■■□□□ 1.87
LDB1-202ENST00000425280 PRDM4Q9UKN5 801 aa26.7■■□□□ 1.87
LDB1-202ENST00000425280 SLC39A10Q9ULF5 831 aa26.7■■□□□ 1.87
LDB1-202ENST00000425280 CLEC4EQ9ULY5 219 aa26.7■■□□□ 1.87
LDB1-202ENST00000425280 PLIN3O60664 434 aa26.7■■□□□ 1.86
LDB1-202ENST00000425280 DDX6P26196 483 aaKnown RBP eCLIP26.7■■□□□ 1.86
LDB1-202ENST00000425280 HOXA9P31269 272 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms