RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 NOP9Q86U38 636 aaKnown RBP17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 VPS36Q86VN1 386 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 EMC1Q8N766 993 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 CCDC3Q9BQI4 270 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 TUBGCP2Q9BSJ2 902 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 NAA15Q9BXJ9 866 aaKnown RBP17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 CLPBQ9H078 707 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 METTL5Q9NRN9 209 aaKnown RBP17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 NTN3O00634 580 aaPredicted RBP17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 KDELR3O43731 214 aa17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 MMP20O60882 483 aa17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 RAMP2O60895 175 aa17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 MMEP08473 750 aa17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 PRKCSHP14314 528 aaPredicted RBP17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 TSHRP16473 764 aa17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 PDX1P52945 283 aa17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 PPARDQ03181 441 aa17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 RAD51Q06609 339 aa17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 RAB6CQ53S08 254 aa17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 CCDC81Q6ZN84 652 aa17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 CXorf40AQ8TE69 158 aa17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 MED8Q96G25 268 aa17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 RAB6CQ9H0N0 254 aa17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 MBNL1Q9NR56 388 aaKnown RBP17.08■□□□□ 0.32
UPF3AP3-201ENST00000420996 ZSCAN5CA6NGD5 496 aaPredicted RBP17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 FAM72CH0Y354 149 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 CASC3O15234 703 aaKnown RBP17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 LRIG2O94898 1065 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 ITGA2BP08514 1039 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 PLEKP08567 350 aaPredicted RBP17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 UCHL3P15374 230 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 BLKP51451 505 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 CLN3Q13286 438 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 ELOCQ15369 112 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 CDO1Q16878 200 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 C15orf59Q2T9L4 293 aaPredicted RBP17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 CCDC14Q49A88 953 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 LRRC73Q5JTD7 316 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 ATXN7L2Q5T6C5 722 aaPredicted RBP17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 FAM72AQ5TYM5 149 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 KIAA1614Q5VZ46 1190 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 FAM72DQ6L9T8 149 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 LVRNQ6Q4G3 990 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 LEKR1Q6ZMV7 388 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 FAM72BQ86X60 149 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 FSTL5Q8N475 847 aaPredicted RBP17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 TP53I13Q8NBR0 393 aaPredicted RBP17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 RXFP2Q8WXD0 754 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 SCG3Q8WXD2 468 aaKnown RBP17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 TBC1D31Q96DN5 1066 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 LIN37Q96GY3 246 aaPredicted RBP17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 GDAP1L1Q96MZ0 367 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 EPAS1Q99814 870 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 TTYH3Q9C0H2 523 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 DKK3Q9UBP4 350 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 NEU3Q9UQ49 428 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 MFHAS1Q9Y4C4 1052 aa17.07■□□□□ 0.32
UPF3AP3-201ENST00000420996 LRRK1Q38SD2 2015 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 TMEM110-MUSTN1A8MSY1 372 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 TMCC1O94876 653 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 TIMP2P16035 220 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 SDC4P31431 198 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 PTPN9P43378 593 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 PEX5P50542 639 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 KLHL40Q2TBA0 621 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 STRADAQ7RTN6 431 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 ZNF677Q86XU0 584 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 SDR16C5Q8N3Y7 309 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 EPS8L1Q8TE68 723 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 CASKIN2Q8WXE0 1202 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 CCNL2Q96S94 520 aaPredicted RBP17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 STK33Q9BYT3 514 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 MAGEB5Q9BZ81 275 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 SYNDIG1Q9H7V2 258 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 GULP1Q9UBP9 304 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 DOLKQ9UPQ8 538 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 TENM4Q6N022 2769 aa17.06■□□□□ 0.32
UPF3AP3-201ENST00000420996 C2CD4BA6NLJ0 364 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 F8VZ95 297 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 TMX2-CTNND1H3BSU7 103 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 PLD2O14939 933 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 BUB1O43683 1085 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 IGSF6O95976 241 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 ALPIP09923 528 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 ITIH2P19823 946 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 MMP8P22894 467 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 SUOXP51687 545 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 HK3P52790 923 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 EIF3IQ13347 325 aaKnown RBP17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 ZSCAN23Q3MJ62 389 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 TMEM52BQ4KMG9 183 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 INO80DQ53TQ3 878 aaPredicted RBP17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 ARL10Q8N8L6 244 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 GPT2Q8TD30 523 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 CENPIQ92674 756 aaPredicted RBP17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 NOCTQ9UK39 431 aaKnown RBP17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 ATXN7L1Q9ULK2 861 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms