RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 INO80DQ53TQ3 878 aaPredicted RBP17.51■□□□□ 0.39
PTCD1-202ENST00000419981 CLEC17AQ6ZS10 378 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 CXorf40AQ8TE69 158 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 CENPTQ96BT3 561 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 FCRL3Q96P31 734 aaPredicted RBP17.51■□□□□ 0.39
PTCD1-202ENST00000419981 MCEEQ96PE7 176 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 IL12RB2Q99665 862 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 CATSPERBQ9H7T0 1116 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 SPASTQ9UBP0 616 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 APOBEC3BQ9UH17 382 aaKnown RBP17.51■□□□□ 0.39
PTCD1-202ENST00000419981 LIMA1Q9UHB6 759 aaKnown RBP17.51■□□□□ 0.39
PTCD1-202ENST00000419981 SALL4Q9UJQ4 1053 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 FZD10Q9ULW2 581 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 ZFC3H1O60293 1989 aaKnown RBP17.51■□□□□ 0.39
PTCD1-202ENST00000419981 UNC13CQ8NB66 2214 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 TCRBV5S1A1TA0A578 114 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 RASA4BC9J798 803 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 TPP1O14773 563 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 RASA4O43374 803 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 MMP20O60882 483 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 USP12O75317 370 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 MPOP05164 745 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 DESP17661 470 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 AIF1P55008 147 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 YPEL5P62699 121 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 GABREP78334 506 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 MYL5Q02045 173 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 UBXN1Q04323 297 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 PARP15Q460N3 678 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 SASS6Q6UVJ0 657 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 RBFAQ8N0V3 343 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 LSMEM2Q8N112 164 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 NETO2Q8NC67 525 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 HMCESQ96FZ2 354 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 ERGIC2Q96RQ1 377 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 LGMNQ99538 433 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 AGPAT1Q99943 283 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 NCAPGQ9BPX3 1015 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 KLC2Q9H0B6 622 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 DKK3Q9UBP4 350 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 MFHAS1Q9Y4C4 1052 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 RAI2Q9Y5P3 530 aa17.5■□□□□ 0.39
PTCD1-202ENST00000419981 CPED1A4D0V7 1026 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 EME2A4GXA9 379 aaPredicted RBP17.49■□□□□ 0.39
PTCD1-202ENST00000419981 WASH4PA8MWX3 477 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 TOR1BO14657 336 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 TGM2P21980 687 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 XPAP23025 273 aaPredicted RBP17.49■□□□□ 0.39
PTCD1-202ENST00000419981 PCBP4P57723 403 aaKnown RBP17.49■□□□□ 0.39
PTCD1-202ENST00000419981 RPL7AP62424 266 aaKnown RBP17.49■□□□□ 0.39
PTCD1-202ENST00000419981 ELP6Q0PNE2 266 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 SERINC3Q13530 473 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 NR0B2Q15466 257 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 PRRT3Q5FWE3 981 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 GUSBP11Q6P575 273 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 MACC1Q6ZN28 852 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 EFL1Q7Z2Z2 1120 aaKnown RBP17.49■□□□□ 0.39
PTCD1-202ENST00000419981 SPACA3Q8IXA5 215 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 PHACTR4Q8IZ21 702 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 TP53I13Q8NBR0 393 aaPredicted RBP17.49■□□□□ 0.39
PTCD1-202ENST00000419981 ZNF248Q8NDW4 579 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 ZNF578Q96N58 590 aaPredicted RBP17.49■□□□□ 0.39
PTCD1-202ENST00000419981 CNPY3Q9BT09 278 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 WRAP53Q9BUR4 548 aaKnown RBP17.49■□□□□ 0.39
PTCD1-202ENST00000419981 CPEB1Q9BZB8 566 aaKnown RBP17.49■□□□□ 0.39
PTCD1-202ENST00000419981 SLC13A1Q9BZW2 595 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 POLR1BQ9H9Y6 1135 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 ANO10Q9NW15 660 aa17.49■□□□□ 0.39
PTCD1-202ENST00000419981 FGF10O15520 208 aaPredicted RBP17.48■□□□□ 0.39
PTCD1-202ENST00000419981 LZTS3O60299 673 aaPredicted RBP17.48■□□□□ 0.39
PTCD1-202ENST00000419981 DXOO77932 396 aaKnown RBP17.48■□□□□ 0.39
PTCD1-202ENST00000419981 CDK11BP21127 795 aaKnown RBP17.48■□□□□ 0.39
PTCD1-202ENST00000419981 LSSP48449 732 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 SUOXP51687 545 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 TPI1P60174 286 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 TLE3Q04726 772 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 STX1AQ16623 288 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 KLHL40Q2TBA0 621 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 FAXCQ5TGI0 409 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 DCUN1D2Q6PH85 259 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 DNAAF5Q86Y56 855 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 UMODL1-AS1Q8N2C9 162 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 GLMNQ92990 594 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 EXOC2Q96KP1 924 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 TBATAQ96M53 351 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 LRRC61Q9BV99 259 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 BOCQ9BWV1 1114 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 TCEAL2Q9H3H9 227 aaPredicted RBP17.48■□□□□ 0.39
PTCD1-202ENST00000419981 LHX3Q9UBR4 397 aa17.48■□□□□ 0.39
PTCD1-202ENST00000419981 UBA2Q9UBT2 640 aaPredicted RBP17.48■□□□□ 0.39
PTCD1-202ENST00000419981 ATXN7O15265 892 aaPredicted RBP17.47■□□□□ 0.39
PTCD1-202ENST00000419981 GCATO75600 419 aa17.47■□□□□ 0.39
PTCD1-202ENST00000419981 PIGNO95427 931 aa17.47■□□□□ 0.39
PTCD1-202ENST00000419981 ANXA6P08133 673 aa17.47■□□□□ 0.39
PTCD1-202ENST00000419981 CCDC172P0C7W6 258 aa17.47■□□□□ 0.39
PTCD1-202ENST00000419981 TIMP2P16035 220 aa17.47■□□□□ 0.39
PTCD1-202ENST00000419981 ITIH2P19823 946 aa17.47■□□□□ 0.39
PTCD1-202ENST00000419981 HTR7P34969 479 aa17.47■□□□□ 0.39
PTCD1-202ENST00000419981 EIF4A3P38919 411 aaKnown RBP17.47■□□□□ 0.39
PTCD1-202ENST00000419981 RPIAP49247 311 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms