RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 AMPD1P23109 780 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 ST3GAL2Q16842 350 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 TSR1Q2NL82 804 aaKnown RBP16.66■□□□□ 0.26
LINC00404-201ENST00000418660 ASTE1Q2TB18 679 aaPredicted RBP16.66■□□□□ 0.26
LINC00404-201ENST00000418660 TMCO3Q6UWJ1 677 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 KYAT3Q6YP21 454 aaKnown RBP16.66■□□□□ 0.26
LINC00404-201ENST00000418660 ARHGAP36Q6ZRI8 547 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 Q6ZSR6 202 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 EID2Q8N6I1 236 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 RNF214Q8ND24 703 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 KNL1Q8NG31 2342 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 ZNF564Q8TBZ8 553 aaPredicted RBP16.66■□□□□ 0.26
LINC00404-201ENST00000418660 GATA6Q92908 595 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 ZNF641Q96N77 438 aaPredicted RBP16.66■□□□□ 0.26
LINC00404-201ENST00000418660 CSPG4P5Q96PW8 444 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 TUBGCP5Q96RT8 1024 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 KLF6Q99612 283 aaPredicted RBP16.66■□□□□ 0.26
LINC00404-201ENST00000418660 CALN1Q9BXU9 219 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 SUV39H2Q9H5I1 410 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 PCDH18Q9HCL0 1135 aa16.66■□□□□ 0.26
LINC00404-201ENST00000418660 IPO11Q9UI26 975 aaKnown RBP16.66■□□□□ 0.26
LINC00404-201ENST00000418660 ACACBO00763 2458 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 SSU72P8A0A1W2PR75 194 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 TSPAN11A1L157 253 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 POM121BA6NF01 834 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 GOLGA8CPA6NN73 597 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 FPGTO14772 594 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 PIGNO95427 931 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 H2AFZP0C0S5 128 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 XPAP23025 273 aaPredicted RBP16.65■□□□□ 0.26
LINC00404-201ENST00000418660 NSUN2Q08J23 767 aaKnown RBP eCLIP16.65■□□□□ 0.26
LINC00404-201ENST00000418660 HADHQ16836 314 aaKnown RBP16.65■□□□□ 0.26
LINC00404-201ENST00000418660 H2AFVQ71UI9 128 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 SRLQ86TD4 932 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 TP53INP2Q8IXH6 220 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 SLC22A18ASQ8N1D0 253 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 TSEN2Q8NCE0 465 aaKnown RBP16.65■□□□□ 0.26
LINC00404-201ENST00000418660 DENND6BQ8NEG7 585 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 CXorf40AQ8TE69 158 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 CTNNBL1Q8WYA6 563 aaPredicted RBP16.65■□□□□ 0.26
LINC00404-201ENST00000418660 TSC1Q92574 1164 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 IFT43Q96FT9 208 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 ZNF599Q96NL3 588 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 CINPQ9BW66 212 aaPredicted RBP16.65■□□□□ 0.26
LINC00404-201ENST00000418660 DEF6Q9H4E7 631 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 GPR27Q9NS67 375 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 ETNK2Q9NVF9 386 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 CTTNBP2NLQ9P2B4 639 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 RCOR3Q9P2K3 495 aaPredicted RBP16.65■□□□□ 0.26
LINC00404-201ENST00000418660 UVRAGQ9P2Y5 699 aa16.65■□□□□ 0.26
LINC00404-201ENST00000418660 COL5A1P20908 1838 aaPredicted RBP16.65■□□□□ 0.26
LINC00404-201ENST00000418660 ENC1O14682 589 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 BUB1BO60566 1050 aaPredicted RBP16.64■□□□□ 0.25
LINC00404-201ENST00000418660 TM7SF2O76062 418 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 PROSCO94903 275 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 ITIH2P19823 946 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 SSR1P43307 286 aaKnown RBP16.64■□□□□ 0.25
LINC00404-201ENST00000418660 RABIFP47224 123 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 RGRP47804 291 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 ELP6Q0PNE2 266 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 KRT81Q14533 505 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 UGP2Q16851 508 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 TMEM52BQ4KMG9 183 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 LRRC73Q5JTD7 316 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 BRAT1Q6PJG6 821 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 PTAR1Q7Z6K3 402 aaPredicted RBP16.64■□□□□ 0.25
LINC00404-201ENST00000418660 FAM71BQ8TC56 605 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 CENPTQ96BT3 561 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 CNDP2Q96KP4 475 aaKnown RBP16.64■□□□□ 0.25
LINC00404-201ENST00000418660 PSKH2Q96QS6 385 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 PACSIN1Q9BY11 444 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 ATP13A3Q9H7F0 1226 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 ABHD10Q9NUJ1 306 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 SEPT3Q9UH03 358 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 LCMT1Q9UIC8 334 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 DOCK9Q9BZ29 2069 aa16.64■□□□□ 0.25
LINC00404-201ENST00000418660 TMEM8BA6NDV4 472 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 AKR1B10O60218 316 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 MMP20O60882 483 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 SDC3O75056 442 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 MFAP3LO75121 409 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 IL4RP24394 825 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 SERPINA4P29622 427 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 SERPINB6P35237 376 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 RENBPP51606 427 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 CDH6P55285 790 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 LBRQ14739 615 aaKnown RBP16.63■□□□□ 0.25
LINC00404-201ENST00000418660 CFAP58Q5T655 872 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 TMCO4Q5TGY1 634 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 CCNI2Q6ZMN8 369 aaPredicted RBP16.63■□□□□ 0.25
LINC00404-201ENST00000418660 TMPRSS7Q7RTY8 843 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 CAMK1DQ8IU85 385 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 SLC25A45Q8N413 288 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 CHP1Q99653 195 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 C1QTNF7Q9BXJ2 289 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 PCDHGA1Q9Y5H4 931 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 CABIN1Q9Y6J0 2220 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 CHD8Q9HCK8 2581 aa16.63■□□□□ 0.25
LINC00404-201ENST00000418660 TPRP12270 2363 aaKnown RBP16.63■□□□□ 0.25
LINC00404-201ENST00000418660 SPTY2D1-AS1A0A0U1RR47 76 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms