RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 TARM1B6A8C7 271 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 G3V2L1 256 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 TGM5O43548 720 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 UNC5CO95185 931 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 WISP3O95389 354 aaPredicted RBP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 C1RP00736 705 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 SERPINF2P08697 491 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 CNPP09543 421 aaKnown RBP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 SLC35E2BP0CK96 405 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 MBL2P11226 248 aaPredicted RBP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 ALOX15P16050 662 aaPredicted RBP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 CRABP2P29373 138 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 PRKAA2P54646 552 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 POU4F1Q01851 419 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 ITKQ08881 620 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 STX3Q13277 289 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 ZNF177Q13360 481 aaPredicted RBP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 PPIGQ13427 754 aaKnown RBP eCLIP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 THOC5Q13769 683 aaKnown RBP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 SEPT6Q14141 434 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 PCSK7Q16549 785 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 CTC1Q2NKJ3 1217 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 TAF1BQ53T94 588 aaPredicted RBP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 PPM1JQ5JR12 505 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 ZNF470Q6ECI4 717 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 NEPROQ6NW34 567 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 FAM117BQ6P1L5 589 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 C16orf46Q6P387 395 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 ASRGL1Q7L266 308 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 C16orf59Q7L2K0 433 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 ZNF354CQ86Y25 554 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 MFSD6LQ8IWD5 586 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 CENPLQ8N0S6 344 aaPredicted RBP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 PLD6Q8N2A8 252 aaKnown RBP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 MICALL1Q8N3F8 863 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 TMEM151AQ8N4L1 468 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 FIBCD1Q8N539 461 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 SLC25A41Q8N5S1 370 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 ACVR1CQ8NER5 493 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 GPR150Q8NGU9 434 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 STON2Q8WXE9 905 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 AUTS2Q8WXX7 1259 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 ERP27Q96DN0 273 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 LRRC37BQ96QE4 947 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 NUDCD1Q96RS6 583 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 CINPQ9BW66 212 aaPredicted RBP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 TMEM120AQ9BXJ8 343 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 ATXN3LQ9H3M9 355 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 ECT2Q9H8V3 914 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 GKN1Q9NS71 199 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 TXLNGQ9NUQ3 528 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 FBXO5Q9UKT4 447 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 CORO1CQ9ULV4 474 aaPredicted RBP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 ZNF510Q9Y2H8 683 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 OR51B4Q9Y5P0 310 aa9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 KIF26AQ9ULI4 1882 aaPredicted RBP9.13□□□□□ -0.95
LINCMD1-201ENST00000418518 A0A087X1B8 175 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 FAM95CA0A1B0GW59 222 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 TMEM114B3SHH9 223 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 GOLGA8TH3BQL2 631 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 TRAFD1O14545 582 aaPredicted RBP9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 HNRNPCL1O60812 293 aaKnown RBP9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 LUC7L3O95232 432 aaKnown RBP9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 CD160O95971 181 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 SBK3P0C264 359 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 ACRP10323 421 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 NEFHP12036 1026 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 CPA3P15088 417 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 HOXB8P17481 243 aaPredicted RBP9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 OGNP20774 298 aaKnown RBP9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 RGRP47804 291 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 ZNF140P52738 457 aaPredicted RBP9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 ARFIP2P53365 341 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 EPHA5P54756 1037 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 RAB10P61026 200 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 SMAD3P84022 425 aaKnown RBP9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 ARF5P84085 180 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 MPP1Q00013 466 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 IRF9Q00978 393 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 SF3A3Q12874 501 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 OVGP1Q12889 678 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 SLC12A1Q13621 1099 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 USP10Q14694 798 aaKnown RBP9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 CYTH1Q15438 398 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 DLG2Q15700 870 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 SMAD1Q15797 465 aaKnown RBP9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 TSNAXIP1Q2TAA8 658 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 HSF5Q4G112 596 aaPredicted RBP9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 INO80DQ53TQ3 878 aaPredicted RBP9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 MPP7Q5T2T1 576 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 ZYG11AQ6WRX3 759 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 CCDC149Q6ZUS6 474 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 HTR3DQ70Z44 454 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 GAREM2Q75VX8 874 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 CLNKQ7Z7G1 428 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 CRLF3Q8IUI8 442 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 CILP2Q8IUL8 1156 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 DENND6AQ8IWF6 608 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms