RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 NCEH1Q6PIU2 408 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 MFSD7Q6UXD7 560 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 ERN2Q76MJ5 926 aaKnown RBP10.65□□□□□ -0.7
RFC1-203ENST00000418436 KIAA2013Q8IYS2 634 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 RCOR2Q8IZ40 523 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 RYBPQ8N488 228 aaPredicted RBP10.65□□□□□ -0.7
RFC1-203ENST00000418436 ATPAF2Q8N5M1 289 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 TEX26Q8N6G2 289 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 TSEN2Q8NCE0 465 aaKnown RBP10.65□□□□□ -0.7
RFC1-203ENST00000418436 OR6K2Q8NGY2 324 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 OR14C36Q8NHC7 312 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 EXD1Q8NHP7 514 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 CEP76Q8TAP6 659 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 KIAA1524Q8TCG1 905 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 HCAR2Q8TDS4 363 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 KRT35Q92764 455 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 PPP1R16AQ96I34 528 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 SMOC1Q9H4F8 434 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 DTLQ9NZJ0 730 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 TRIM10Q9UDY6 481 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 SEPT3Q9UH03 358 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 TPX2Q9ULW0 747 aaKnown RBP10.65□□□□□ -0.7
RFC1-203ENST00000418436 PCDHA3Q9Y5H8 950 aa10.65□□□□□ -0.7
RFC1-203ENST00000418436 ATXN2Q99700 1313 aaKnown RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 TSPAN11A1L157 253 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 C16orf96A6NNT2 1141 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 MEI4A8MW99 385 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 PATE3B3GLJ2 98 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 APOL1O14791 398 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 KHNYNO15037 678 aaKnown RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 LATO43561 262 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 ZRANB2O95218 330 aaKnown RBP eCLIP10.64□□□□□ -0.71
RFC1-203ENST00000418436 UGT2B4P06133 528 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 ADRB3P13945 408 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 ZFXP17010 805 aaPredicted RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 CR2P20023 1033 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 CCNCP24863 283 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 CTNNA2P26232 953 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 CD27P26842 260 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 HSPA9P38646 679 aaKnown RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 PEX5P50542 639 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 RENBPP51606 427 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 NEK3P51956 506 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 NAP1L1P55209 391 aaKnown RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 HNRNPDQ14103 355 aaKnown RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 GRM3Q14832 879 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 SF3A2Q15428 464 aaKnown RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 DUOXA1Q1HG43 343 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 GDPD4Q6W3E5 623 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 SPOCD1Q6ZMY3 1216 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 ZNF662Q6ZS27 426 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 PARS2Q7L3T8 475 aaKnown RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 RABEPKQ7Z6M1 372 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 SRLQ86TD4 932 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 NT5DC3Q86UY8 548 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 TRIM69Q86WT6 500 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 RGL4Q8IZJ4 473 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 PGBD5Q8N414 524 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 RNF10Q8N5U6 811 aaKnown RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 MAML1Q92585 1016 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 HPS1Q92902 700 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 HDAC11Q96DB2 347 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 EXOC2Q96KP1 924 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 NSMCE3Q96MG7 304 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 KLHL32Q96NJ5 620 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 TUBGCP5Q96RT8 1024 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 CINPQ9BW66 212 aaPredicted RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 MAK16Q9BXY0 300 aaKnown RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 EBF2Q9HAK2 575 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 CAPN10Q9HC96 672 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 PREBQ9HCU5 417 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 DYRK4Q9NR20 520 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 DKK3Q9UBP4 350 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 SUSD2Q9UGT4 822 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 EIF2B4Q9UI10 523 aaKnown RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 SLC6A14Q9UN76 642 aa10.64□□□□□ -0.71
RFC1-203ENST00000418436 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.64□□□□□ -0.71
RFC1-203ENST00000418436 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 PTPRZ1P23471 2315 aaPredicted RBP10.64□□□□□ -0.71
RFC1-203ENST00000418436 TP53BP1Q12888 1972 aaPredicted RBP10.63□□□□□ -0.71
RFC1-203ENST00000418436 LAMA1P25391 3075 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 hCG_1818297A0A087WSY0 165 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TBC1D3DA0A087WVF3 549 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TBC1D3IA0A087WXS9 549 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TBC1D3EA0A087X179 549 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TBC1D3KA0A087X1G2 549 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 A0A1B0GTW7 788 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 A0A1W2PPC4 97 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 MACROD2A1Z1Q3 448 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 CCDC66A2RUB6 948 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TBC1D3FA6NER0 549 aaPredicted RBP10.63□□□□□ -0.71
RFC1-203ENST00000418436 FAM47DPA6NHR8 397 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TBC1D3LB9A6J9 549 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 MATN3O15232 486 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 AP1G1O43747 822 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 FSBPO95073 299 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 MAP3K6O95382 1288 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 SERPINF2P08697 491 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TBC1D3HP0C7X1 549 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 KRT10P13645 584 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms