RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 A0A1W2PQ67 120 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 HACD1B0YJ81 288 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 AP1G1O43747 822 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 PIGNO95427 931 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 JCHAINP01591 159 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 PECAM1P16284 738 aaPredicted RBP23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 CR2P20023 1033 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 POLR2LP62875 67 aaKnown RBP23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 IFI35P80217 286 aaPredicted RBP23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 SPEM2Q0P670 501 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 ZNF211Q13398 564 aaPredicted RBP23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 XRCC4Q13426 336 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 CAMK1DQ8IU85 385 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 ABCA7Q8IZY2 2146 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 DCLK2Q8N568 766 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 LRRN4Q8WUT4 740 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 BIRC7Q96CA5 298 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 FEM1CQ96JP0 617 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 FERMT1Q9BQL6 677 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 MYO15AQ9UKN7 3530 aa23.34■■□□□ 1.33
SMARCB1-205ENST00000417137 KCNK1O00180 336 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 NEMP1O14524 444 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 PCDH8O95206 1070 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 ZNF806P0C7X5 589 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 NUDT1P36639 197 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 TAS2R38P59533 333 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 MAXP61244 160 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 CSRP2Q16527 193 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 PLA2G2CQ5R387 149 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 SEL1L2Q5TEA6 688 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 PRPF39Q86UA1 669 aaKnown RBP23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 ZSCAN30Q86W11 494 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 TTC13Q8NBP0 860 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 VOPP1Q96AW1 172 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 HAUS1Q96CS2 278 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 IL12RB2Q99665 862 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 MIR1-1HGQ9H1L0 117 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 NOD2Q9HC29 1040 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 SEMA4GQ9NTN9 838 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 EIF2B4Q9UI10 523 aaKnown RBP23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 TTLL3Q9Y4R7 772 aa23.33■■□□□ 1.33
SMARCB1-205ENST00000417137 PRR5-ARHGAP8B1AHC4 643 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 TSPAN6O43657 245 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 SOCS5O75159 536 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 MSNP26038 577 aaKnown RBP23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 CD27P26842 260 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 MAOBP27338 520 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 PRKD1Q15139 912 aaPredicted RBP23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 DUOXA1Q1HG43 343 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 PEAR1Q5VY43 1037 aaPredicted RBP23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 AADACL2Q6P093 401 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 ZC3H18Q86VM9 953 aaKnown RBP23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 TRIM69Q86WT6 500 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 REXO1L1PQ8IX06 675 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 SEMA3CQ99985 751 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 TMEM74BQ9NUR3 256 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 SEPT10Q9P0V9 454 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 ATP8A1Q9Y2Q0 1164 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 FADS3Q9Y5Q0 445 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 THADAQ6YHU6 1953 aa23.32■■□□□ 1.32
SMARCB1-205ENST00000417137 RIF1Q5UIP0 2472 aaKnown RBP23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 TSPAN11A1L157 253 aa23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 H7C0C1 242 aa23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 KHNYNO15037 678 aaKnown RBP23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 RNGTTO60942 597 aaKnown RBP23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 ZNF189O75820 626 aaPredicted RBP23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 IGHV4-34P06331 123 aa23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 TIMP2P16035 220 aa23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 NFKBIAP25963 317 aa23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 ATP5OP48047 213 aa23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 ELP6Q0PNE2 266 aa23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 NOMO1Q15155 1222 aa23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 UGP2Q16851 508 aa23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 ALG1LQ6GMV1 187 aa23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 ERAP2Q6P179 960 aa23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 TRMT1Q9NXH9 659 aaKnown RBP23.31■■□□□ 1.32
SMARCB1-205ENST00000417137 A0A1B0GTW7 788 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 A0A1W2PPC4 97 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 TTC24A2A3L6 582 aaPredicted RBP23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 HLA-DQB2P05538 268 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 SERPINF2P08697 491 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 CA4P22748 312 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 RPS21P63220 83 aaKnown RBP23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 OTUD4Q01804 1114 aaKnown RBP23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 TEX44Q53QW1 395 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 SLC45A4Q5BKX6 768 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 KIAA1161Q6NSJ0 714 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 HORMAD1Q86X24 394 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 C12orf50Q8NA57 414 aaPredicted RBP23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 ACTL9Q8TC94 416 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 ECHDC3Q96DC8 303 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 VAT1Q99536 393 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 HERPUD2Q9BSE4 406 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 NUSAP1Q9BXS6 441 aaKnown RBP23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 CARD9Q9H257 536 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 JRKLQ9Y4A0 524 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 PCDHGC4Q9Y5F7 938 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 SPTBN4Q9H254 2564 aa23.3■■□□□ 1.32
SMARCB1-205ENST00000417137 ATXN2Q99700 1313 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms