RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 RFPL3O75679 317 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 PIAS2O75928 621 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 IGSF6O95976 241 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 MYBL1P10243 752 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 ACP1P24666 158 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 RABIFP47224 123 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 ILKQ13418 452 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 ACAP1Q15027 740 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 ZNF542PQ5EBM4 170 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 KYAT3Q6YP21 454 aaKnown RBP18.09■□□□□ 0.49
CPNE1-210ENST00000416778 RFX8Q6ZV50 586 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 ARHGAP12Q8IWW6 846 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 MDM1Q8TC05 714 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 ZNF653Q96CK0 615 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 ARHGEF26Q96DR7 871 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 SUV39H2Q9H5I1 410 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 MRPL47Q9HD33 250 aaKnown RBP18.09■□□□□ 0.49
CPNE1-210ENST00000416778 CWC15Q9P013 229 aaKnown RBP18.09■□□□□ 0.49
CPNE1-210ENST00000416778 MYO1AQ9UBC5 1043 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 DKK4Q9UBT3 224 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 KLF15Q9UIH9 416 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 CAPN11Q9UMQ6 739 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 COL5A1P20908 1838 aaPredicted RBP18.09■□□□□ 0.49
CPNE1-210ENST00000416778 ARHGAP42A6NI28 874 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 DAPK3O43293 454 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 CSF2P04141 144 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 JUPP14923 745 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 IL1R2P27930 398 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 PCK1P35558 622 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 CSNK1DP48730 415 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 CLDN6P56747 220 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 PFN3P60673 137 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 TMEM52BQ4KMG9 183 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 TPRG1LQ5T0D9 272 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 PTAR1Q7Z6K3 402 aaPredicted RBP18.08■□□□□ 0.48
CPNE1-210ENST00000416778 PDCD7Q8N8D1 485 aaKnown RBP18.08■□□□□ 0.48
CPNE1-210ENST00000416778 OR4C6Q8NH72 309 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 CPLX3Q8WVH0 158 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 TRIM11Q96F44 468 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 NCAPGQ9BPX3 1015 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 SCINQ9Y6U3 715 aa18.08■□□□□ 0.48
CPNE1-210ENST00000416778 SCAMP1O15126 338 aa18.07■□□□□ 0.48
CPNE1-210ENST00000416778 SUOXP51687 545 aa18.07■□□□□ 0.48
CPNE1-210ENST00000416778 ZNF135P52742 658 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-210ENST00000416778 TPM4P67936 248 aa18.07■□□□□ 0.48
CPNE1-210ENST00000416778 ZBED6P86452 979 aa18.07■□□□□ 0.48
CPNE1-210ENST00000416778 CYP4F3Q08477 520 aa18.07■□□□□ 0.48
CPNE1-210ENST00000416778 NSUN2Q08J23 767 aaKnown RBP eCLIP18.07■□□□□ 0.48
CPNE1-210ENST00000416778 DPYSQ14117 519 aa18.07■□□□□ 0.48
CPNE1-210ENST00000416778 BOLA3Q53S33 107 aa18.07■□□□□ 0.48
CPNE1-210ENST00000416778 PPP6R3Q5H9R7 873 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-210ENST00000416778 LRRC73Q5JTD7 316 aa18.07■□□□□ 0.48
CPNE1-210ENST00000416778 KDM7AQ6ZMT4 941 aa18.07■□□□□ 0.48
CPNE1-210ENST00000416778 DENND6BQ8NEG7 585 aa18.07■□□□□ 0.48
CPNE1-210ENST00000416778 EXOC2Q96KP1 924 aa18.07■□□□□ 0.48
CPNE1-210ENST00000416778 ZNF641Q96N77 438 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-210ENST00000416778 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.07■□□□□ 0.48
CPNE1-210ENST00000416778 MBNL1Q9NR56 388 aaKnown RBP18.07■□□□□ 0.48
CPNE1-210ENST00000416778 DNAJC28Q9NX36 388 aa18.07■□□□□ 0.48
CPNE1-210ENST00000416778 IPO11Q9UI26 975 aaKnown RBP18.07■□□□□ 0.48
CPNE1-210ENST00000416778 TSPAN11A1L157 253 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 NEMP2A6NFY4 417 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 PALMO75781 387 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 TM7SF2O76062 418 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 PIGNO95427 931 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 SERPING1P05155 500 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 TCF4P15884 667 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 RGRP47804 291 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 HNRNPKP61978 463 aaKnown RBP eCLIP18.06■□□□□ 0.48
CPNE1-210ENST00000416778 EIF2B5Q13144 721 aaKnown RBP18.06■□□□□ 0.48
CPNE1-210ENST00000416778 TARDBPQ13148 414 aaKnown RBP eCLIP18.06■□□□□ 0.48
CPNE1-210ENST00000416778 GRM3Q14832 879 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 UGP2Q16851 508 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 ARHGAP36Q6ZRI8 547 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 SRLQ86TD4 932 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 CAMK1DQ8IU85 385 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 TP53INP2Q8IXH6 220 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 CACTIN-AS1Q8N1I8 211 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 NPWQ8N729 165 aa18.06■□□□□ 0.48
CPNE1-210ENST00000416778 TSEN2Q8NCE0 465 aaKnown RBP18.06■□□□□ 0.48
CPNE1-210ENST00000416778 RALYQ9UKM9 306 aaKnown RBP18.06■□□□□ 0.48
CPNE1-210ENST00000416778 APC2O95996 2303 aa18.05■□□□□ 0.48
CPNE1-210ENST00000416778 TP53BP1Q12888 1972 aaPredicted RBP18.05■□□□□ 0.48
CPNE1-210ENST00000416778 A0A087X0T9 212 aa18.05■□□□□ 0.48
CPNE1-210ENST00000416778 FFAR2O15552 330 aa18.05■□□□□ 0.48
CPNE1-210ENST00000416778 FAM228BP0C875 321 aa18.05■□□□□ 0.48
CPNE1-210ENST00000416778 CKMT1AP12532 417 aa18.05■□□□□ 0.48
CPNE1-210ENST00000416778 NME1P15531 152 aaKnown RBP18.05■□□□□ 0.48
CPNE1-210ENST00000416778 AMPD1P23109 780 aa18.05■□□□□ 0.48
CPNE1-210ENST00000416778 E2F1Q01094 437 aa18.05■□□□□ 0.48
CPNE1-210ENST00000416778 IL10RBQ08334 325 aa18.05■□□□□ 0.48
CPNE1-210ENST00000416778 PDE1CQ14123 709 aaPredicted RBP18.05■□□□□ 0.48
CPNE1-210ENST00000416778 PIGHQ14442 188 aaPredicted RBP18.05■□□□□ 0.48
CPNE1-210ENST00000416778 DPYSL2Q16555 572 aa18.05■□□□□ 0.48
CPNE1-210ENST00000416778 POLNQ7Z5Q5 900 aa18.05■□□□□ 0.48
CPNE1-210ENST00000416778 VPS36Q86VN1 386 aa18.05■□□□□ 0.48
CPNE1-210ENST00000416778 LZTR1Q8N653 840 aa18.05■□□□□ 0.48
CPNE1-210ENST00000416778 FAM181AQ8N9Y4 354 aa18.05■□□□□ 0.48
CPNE1-210ENST00000416778 TP53I13Q8NBR0 393 aaPredicted RBP18.05■□□□□ 0.48
CPNE1-210ENST00000416778 CXorf40AQ8TE69 158 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms