RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 SEC24AO95486 1093 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 LSM8O95777 96 aaKnown RBP13.4□□□□□ -0.26
HNF4A-204ENST00000415691 NPR3P17342 541 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 RPL22P35268 128 aaKnown RBP13.4□□□□□ -0.26
HNF4A-204ENST00000415691 GJC1P36383 396 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 ELK3P41970 407 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 BCAP31P51572 246 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 BCAT1P54687 386 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 BST2Q10589 180 aaKnown RBP13.4□□□□□ -0.26
HNF4A-204ENST00000415691 DDR2Q16832 855 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 TCHHL1Q5QJ38 904 aaPredicted RBP13.4□□□□□ -0.26
HNF4A-204ENST00000415691 CYP4A22Q5TCH4 519 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 MRPL43Q8N983 215 aaKnown RBP13.4□□□□□ -0.26
HNF4A-204ENST00000415691 GPR152Q8TDT2 470 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 USTQ9Y2C2 406 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 PCDHB5Q9Y5E4 795 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 ERBB2P04626 1255 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 COL6A2P12110 1019 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 MMP8P22894 467 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 GRIK1P39086 918 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 STT3AP46977 705 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 NFE2Q16621 373 aaPredicted RBP13.4□□□□□ -0.26
HNF4A-204ENST00000415691 DCDC5Q6ZRR9 648 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 PIGZQ86VD9 579 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 SCN4BQ8IWT1 228 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 HIPK4Q8NE63 616 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 TFB1MQ8WVM0 346 aaKnown RBP13.4□□□□□ -0.26
HNF4A-204ENST00000415691 SMARCD1Q96GM5 515 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 SAMD11Q96NU1 681 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 KLHL5Q96PQ7 755 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
HNF4A-204ENST00000415691 NLRC5Q86WI3 1866 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 F8VP50 259 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 KRT38O76015 456 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 ABLIM3O94929 683 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 PRKCHP24723 683 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 NDUFV1P49821 464 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 SMAD3P84022 425 aaKnown RBP13.39□□□□□ -0.27
HNF4A-204ENST00000415691 RAB33AQ14088 237 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 GK3PQ14409 553 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 GPRIN1Q7Z2K8 1008 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 SCUBE3Q8IX30 993 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 ZNF461Q8TAF7 563 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 NDRG1Q92597 394 aaKnown RBP13.39□□□□□ -0.27
HNF4A-204ENST00000415691 CGREF1Q99674 301 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 SLC4A5Q9BY07 1137 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 ZNF395Q9H8N7 513 aaPredicted RBP13.39□□□□□ -0.27
HNF4A-204ENST00000415691 CYP4F11Q9HBI6 524 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 CSNK1G1Q9HCP0 422 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 FNIP2Q9P278 1114 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 PRSS51A0A1B0GVH4 220 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 TMEM191CA6NGB0 347 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 TRIM64CA6NLI5 447 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 HHLA1C9JL84 531 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 LCP1P13796 627 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 CDKL1Q00532 357 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 UBE3AQ05086 875 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 DPYSQ14117 519 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 CLPPQ16740 277 aaPredicted RBP13.39□□□□□ -0.27
HNF4A-204ENST00000415691 ATP13A4Q4VNC1 1196 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 FSCBQ5H9T9 825 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 C6orf52Q5T4I8 152 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 PDPK2PQ6A1A2 396 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 NIPAL1Q6NVV3 410 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 PAOXQ6QHF9 649 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 FRMD7Q6ZUT3 714 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 POLNQ7Z5Q5 900 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 IGDCC3Q8IVU1 814 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 CLEC4CQ8WTT0 213 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 CHPT1Q8WUD6 406 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 SEPT5Q99719 369 aaPredicted RBP13.39□□□□□ -0.27
HNF4A-204ENST00000415691 NEURL2Q9BR09 285 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
HNF4A-204ENST00000415691 KLHL11Q9NVR0 708 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 SELENONQ9NZV5 590 aa13.39□□□□□ -0.27
HNF4A-204ENST00000415691 CCDC195A0A1B0GUA6 201 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 H3BNH8 94 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 XPO1O14980 1071 aaKnown RBP13.38□□□□□ -0.27
HNF4A-204ENST00000415691 PER2O15055 1255 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 ADAM23O75077 832 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 OCM2P0CE71 109 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 OCMP0CE72 109 aaPredicted RBP13.38□□□□□ -0.27
HNF4A-204ENST00000415691 COX4I1P13073 169 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 CCR3P51677 355 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 MGAT5BQ3V5L5 792 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 CCDC153Q494R4 210 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 TEDDM1Q5T9Z0 273 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 TIFABQ6ZNK6 161 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 GPR180Q86V85 440 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 DDHD1Q8NEL9 900 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 RSAD2Q8WXG1 361 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 ZNF778Q96MU6 729 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 OSBPL11Q9BXB4 747 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.38□□□□□ -0.27
HNF4A-204ENST00000415691 PNPLA3Q9NST1 481 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 SCHIP1Q9P0W5 487 aaPredicted RBP13.38□□□□□ -0.27
HNF4A-204ENST00000415691 DNAJC16Q9Y2G8 782 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 TTLL3Q9Y4R7 772 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 TCRBV7S3A2A0A539 114 aa13.38□□□□□ -0.27
HNF4A-204ENST00000415691 TGM5O43548 720 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms