RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 GFRA2O00451 464 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 PRPF4O43172 522 aaKnown RBP eCLIP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 RFPL2O75678 378 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 ARHGEF15O94989 841 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 ZWINTO95229 277 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 LUC7L3O95232 432 aaKnown RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 EPOP01588 193 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 SERPINF2P08697 491 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 GJA1P17302 382 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 TPH1P17752 444 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 KRT4P19013 534 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 ADRA1DP25100 572 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 HOXD9P28356 352 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 LSP1P33241 339 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 SERPINH1P50454 418 aaKnown RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 SGSHP51688 502 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 SLC18A1P54219 525 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 MAXP61244 160 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 IL9RQ01113 521 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 DSC2Q02487 901 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 NIPAL4Q0D2K0 466 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 DNAJC3Q13217 504 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 OLIG2Q13516 323 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 CAMK1Q14012 370 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 SUZ12Q15022 739 aaKnown RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 SHHQ15465 462 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 TEAD2Q15562 447 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 RAB30Q15771 203 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 PCSK7Q16549 785 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 LRIT3Q3SXY7 679 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 PDPK2PQ6A1A2 396 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 FAM109BQ6ICB4 259 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 DENND5AQ6IQ26 1287 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 RETSATQ6NUM9 610 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 PKN3Q6P5Z2 889 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 TRMT10BQ6PF06 316 aaKnown RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 FOXR1Q6PIV2 292 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 RANBP10Q6VN20 620 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 NLRP9Q7RTR0 991 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 TAX1BP1Q86VP1 789 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 RASSF3Q86WH2 238 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 MFN1Q8IWA4 741 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 CMTM8Q8IZV2 173 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 ZNF557Q8N988 423 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 GABPB2Q8TAK5 448 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 SHKBP1Q8TBC3 707 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 ARRDC2Q8TBH0 407 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 PPP2R3CQ969Q6 453 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 ZNF669Q96BR6 464 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 CERS2Q96G23 380 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 SCARF2Q96GP6 870 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 SGSM3Q96HU1 749 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 FEM1CQ96JP0 617 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 PSKH2Q96QS6 385 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 SEMA3CQ99985 751 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 C2orf49Q9BVC5 232 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 KIFC1Q9BW19 673 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 IQCGQ9H095 443 aaKnown RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 EPN3Q9H201 632 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 PIDD1Q9HB75 910 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 PDFQ9HBH1 243 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 PLAC1Q9HBJ0 212 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 ARNT2Q9HBZ2 717 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 MRM3Q9HC36 420 aaKnown RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 C20orf96Q9NUD7 363 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 HCFC1R1Q9NWW0 138 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 ZFATQ9P243 1243 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 TBC1D14Q9P2M4 693 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 DNMT3BQ9UBC3 853 aaKnown RBP6.71□□□□□ -1.34
HDAC8-211ENST00000415409 VPS28Q9UK41 221 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 SCN5AQ14524 2016 aa6.71□□□□□ -1.34
HDAC8-211ENST00000415409 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.7□□□□□ -1.34
HDAC8-211ENST00000415409 ZCWPW2A0A1B0GU75 182 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.7□□□□□ -1.34
HDAC8-211ENST00000415409 A0A1W2PPM1 405 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 HEATR9A2RTY3 570 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 GMNCA6NCL1 334 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 CXorf49A8MYA2 514 aaPredicted RBP6.7□□□□□ -1.34
HDAC8-211ENST00000415409 TRIM49D1C9J1S8 452 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 SCAMP3O14828 347 aaKnown RBP6.7□□□□□ -1.34
HDAC8-211ENST00000415409 PER2O15055 1255 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 INSIG1O15503 277 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 SPAG7O75391 227 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 PIAS1O75925 651 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 C1QAP02745 245 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 FGF1P05230 155 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 MMP2P08253 660 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 ALADP13716 330 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 HLA-DPA1P20036 260 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 CA4P22748 312 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 SPRP35270 261 aaPredicted RBP6.7□□□□□ -1.34
HDAC8-211ENST00000415409 GP5P40197 560 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 CSKP41240 450 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 CCR2P41597 374 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 ZXDBP98169 803 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 PPARDQ03181 441 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 CDK18Q07002 472 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 SLC20A2Q08357 652 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 SLC12A1Q13621 1099 aa6.7□□□□□ -1.34
HDAC8-211ENST00000415409 SEPT6Q14141 434 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms