RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 IGSF8Q969P0 613 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 ZFRQ96KR1 1074 aaKnown RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 IL12RB2Q99665 862 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 NMUR2Q9GZQ4 415 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 NOL6Q9H6R4 1146 aaKnown RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 ASAH2Q9NR71 780 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 DLGAP2Q9P1A6 1054 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 ZNF510Q9Y2H8 683 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 AP3B1O00203 1094 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 GLRA3O75311 464 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 CLDN11O75508 207 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 ENO1P06733 434 aaKnown RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 BPGMP07738 259 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 HDCP19113 662 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 PSMB4P28070 264 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 PAPOLAP51003 745 aaKnown RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 CDH4P55283 916 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 TNK2Q07912 1038 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 HNRNPDQ14103 355 aaKnown RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 PRPSAP1Q14558 356 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 ALFQ53S48 1182 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 C9orf50Q5SZB4 431 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 FAXCQ5TGI0 409 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 AP1ARQ63HQ0 302 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 LRRC8BQ6P9F7 803 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 GAREM2Q75VX8 874 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 PRPF39Q86UA1 669 aaKnown RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 DENND1CQ8IV53 801 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 IGDCC3Q8IVU1 814 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 LGI2Q8N0V4 545 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 NETO2Q8NC67 525 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 GBP5Q96PP8 586 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 EBNA1BP2Q99848 306 aaKnown RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 NDFIP2Q9NV92 336 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 CPSF2Q9P2I0 782 aaKnown RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 IPO11Q9UI26 975 aaKnown RBP11.72□□□□□ -0.53
RFFL-205ENST00000415395 ZMYM5Q9UJ78 669 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 SOX13Q9UN79 622 aa11.72□□□□□ -0.53
RFFL-205ENST00000415395 TRAV19A0A0A6YYK7 116 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 FAM159BA6NKW6 160 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 H3BNC9 293 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 GRM6O15303 877 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 RAMP2O60895 175 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 SNNO75324 88 aaPredicted RBP11.71□□□□□ -0.54
RFFL-205ENST00000415395 TBX10O75333 385 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 CNTN5O94779 1100 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 AP2A1O95782 977 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 CA3P07451 260 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 AOC1P19801 751 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 GRK2P25098 689 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 OR1E1P30953 314 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 SLC6A4P31645 630 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 MAGEA10P43363 369 aaPredicted RBP11.71□□□□□ -0.54
RFFL-205ENST00000415395 RENBPP51606 427 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 AQP5P55064 265 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 ACTR3P61158 418 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 RPL26P61254 145 aaKnown RBP11.71□□□□□ -0.54
RFFL-205ENST00000415395 ROR2Q01974 943 aaKnown RBP11.71□□□□□ -0.54
RFFL-205ENST00000415395 ZBTB17Q13105 803 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 CAMK1Q14012 370 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 TMCO4Q5TGY1 634 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 C1orf146Q5VVC0 180 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 CAND1Q86VP6 1230 aaKnown RBP11.71□□□□□ -0.54
RFFL-205ENST00000415395 FAM217AQ8IXS0 508 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 ULK2Q8IYT8 1036 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 NDUFAF2Q8N183 169 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 PIP4K2CQ8TBX8 421 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 NAT9Q9BTE0 207 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 LMAN2LQ9H0V9 348 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 MAGEH1Q9H213 219 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 TRPC7Q9HCX4 862 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 ZDHHC7Q9NXF8 308 aa11.71□□□□□ -0.54
RFFL-205ENST00000415395 LSM7Q9UK45 103 aaKnown RBP11.71□□□□□ -0.54
RFFL-205ENST00000415395 AGO1Q9UL18 857 aaKnown RBP11.71□□□□□ -0.54
RFFL-205ENST00000415395 AAR2Q9Y312 384 aaKnown RBP11.71□□□□□ -0.54
RFFL-205ENST00000415395 A0A1B0GVM2 712 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 TCAF2A6NFQ2 919 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 ZBTB24O43167 697 aaPredicted RBP11.7□□□□□ -0.54
RFFL-205ENST00000415395 CLASP2O75122 1294 aaKnown RBP11.7□□□□□ -0.54
RFFL-205ENST00000415395 XYLBO75191 536 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 RFPL1O75677 317 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 JCHAINP01591 159 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 KLKB1P03952 638 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 ANPEPP15144 967 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 PTPN2P17706 415 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 SMAD3P84022 425 aaKnown RBP11.7□□□□□ -0.54
RFFL-205ENST00000415395 IL10RBQ08334 325 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 DYNC1I2Q13409 638 aaKnown RBP11.7□□□□□ -0.54
RFFL-205ENST00000415395 POLD3Q15054 466 aaPredicted RBP11.7□□□□□ -0.54
RFFL-205ENST00000415395 SHHQ15465 462 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 KCTD11Q693B1 232 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 TXNDC8Q6A555 127 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 ZNF783Q6ZMS7 281 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 Q6ZNB5 142 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 ZNF534Q76KX8 674 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 TFAP2DQ7Z6R9 452 aa11.7□□□□□ -0.54
RFFL-205ENST00000415395 SETD3Q86TU7 594 aaPredicted RBP11.7□□□□□ -0.54
RFFL-205ENST00000415395 ALYREFQ86V81 257 aaKnown RBP11.7□□□□□ -0.54
RFFL-205ENST00000415395 MYLK4Q86YV6 388 aaPredicted RBP11.7□□□□□ -0.54
RFFL-205ENST00000415395 ARL14EPQ8N8R7 260 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms