RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 CPLX3Q8WVH0 158 aa12.6□□□□□ -0.39
NCKIPSD-203ENST00000415281 TBC1D31Q96DN5 1066 aa12.6□□□□□ -0.39
NCKIPSD-203ENST00000415281 PRR11Q96HE9 360 aaPredicted RBP12.6□□□□□ -0.39
NCKIPSD-203ENST00000415281 PPP1R16AQ96I34 528 aa12.6□□□□□ -0.39
NCKIPSD-203ENST00000415281 AGPAT1Q99943 283 aa12.6□□□□□ -0.39
NCKIPSD-203ENST00000415281 TTYH3Q9C0H2 523 aa12.6□□□□□ -0.39
NCKIPSD-203ENST00000415281 CLPBQ9H078 707 aa12.6□□□□□ -0.39
NCKIPSD-203ENST00000415281 PDFQ9HBH1 243 aa12.6□□□□□ -0.39
NCKIPSD-203ENST00000415281 DNAJC28Q9NX36 388 aa12.6□□□□□ -0.39
NCKIPSD-203ENST00000415281 LHX3Q9UBR4 397 aa12.6□□□□□ -0.39
NCKIPSD-203ENST00000415281 MFHAS1Q9Y4C4 1052 aa12.6□□□□□ -0.39
NCKIPSD-203ENST00000415281 PMS2P1A4D2B8 440 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 LRRC53A6NM62 1247 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 MMP20O60882 483 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 RAMP2O60895 175 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 C1QL1O75973 258 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 TMCC1O94876 653 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 POP4O95707 220 aaKnown RBP12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 CELA2BP08218 269 aaPredicted RBP12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 FERP16591 822 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 RGRP47804 291 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 ZNF143P52747 638 aaPredicted RBP12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 CCDC15Q0P6D6 951 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 SERINC3Q13530 473 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 PDE1CQ14123 709 aaPredicted RBP12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 ACAP1Q15027 740 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 CA9Q16790 459 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 ARL13BQ3SXY8 428 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 PERM1Q5SV97 790 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 GDPD4Q6W3E5 623 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 PTAR1Q7Z6K3 402 aaPredicted RBP12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 SLFN11Q7Z7L1 901 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 UMODL1-AS1Q8N2C9 162 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 MSANTD4Q8NCY6 345 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 FAM174AQ8TBP5 190 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 RAB7BQ96AH8 199 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 HMCESQ96FZ2 354 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 HIC2Q96JB3 615 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 LRRC19Q9H756 370 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 SEPT11Q9NVA2 429 aaKnown RBP12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 SSUH2Q9Y2M2 353 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 AK5Q9Y6K8 562 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 CSNK1G3Q9Y6M4 447 aa12.59□□□□□ -0.39
NCKIPSD-203ENST00000415281 RASA4BC9J798 803 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 J3KR12 359 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 FPGTO14772 594 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 RASA4O43374 803 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 CBFA2T2O43439 604 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 PRB1P04280 392 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 TPM3P06753 285 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 GP1BAP07359 652 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 CCDC172P0C7W6 258 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 PBX1P40424 430 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 RABIFP47224 123 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 HNRNPKP61978 463 aaKnown RBP eCLIP12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 SNRPD1P62314 119 aaKnown RBP12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 DAB2P98082 770 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 C1orf61Q13536 156 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 TBC1D25Q3MII6 688 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 TMEM52BQ4KMG9 183 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 INO80DQ53TQ3 878 aaPredicted RBP12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 ACAD10Q6JQN1 1059 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 GUSBP11Q6P575 273 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 TTC7BQ86TV6 843 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 PARGQ86W56 976 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 TP53INP2Q8IXH6 220 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 MCOLN2Q8IZK6 566 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 RYBPQ8N488 228 aaPredicted RBP12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 FGF11Q92914 225 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 PEBP4Q96S96 227 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 BOCQ9BWV1 1114 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 TRIM7Q9C029 511 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 RBSNQ9H1K0 784 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 ASCL3Q9NQ33 180 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 GPATCH2LQ9NWQ4 482 aa12.58□□□□□ -0.4
NCKIPSD-203ENST00000415281 TENM4Q6N022 2769 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 HELZ2Q9BYK8 2649 aaKnown RBP12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 TSPAN11A1L157 253 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 EME2A4GXA9 379 aaPredicted RBP12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 AQP9O43315 295 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 BUB1O43683 1085 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 PIGNO95427 931 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 MPOP05164 745 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 JUNDP17535 347 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 GM2AP17900 193 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 EPHB2P29323 1055 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 ETFBP38117 255 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 ABCG1P45844 678 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 NSFP46459 744 aaKnown RBP12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 PDX1P52945 283 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 YBEYP58557 167 aaPredicted RBP12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 SKOR1P84550 965 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 TLE3Q04726 772 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 ASIC2Q16515 512 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 DEFB133Q30KQ1 61 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 AFMIDQ63HM1 303 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 E4F1Q66K89 784 aaPredicted RBP12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 GAS2L3Q86XJ1 694 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 ARHGAP12Q8IWW6 846 aa12.57□□□□□ -0.4
NCKIPSD-203ENST00000415281 SLC35F3Q8IY50 421 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms